Pseudoduganella lutea: EWM63_01010
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Entry
EWM63_01010 CDS
T10124
Name
(GenBank) sigma-70 family RNA polymerase sigma factor
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
plue Pseudoduganella lutea
Pathway
plue02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
plue00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
EWM63_01010
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
plue03021
]
EWM63_01010
Transcription machinery [BR:
plue03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
EWM63_01010
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
Sigma70_r4
Sigma70_ECF
HTH_23
HTH_24
Motif
Other DBs
NCBI-ProteinID:
QBE61751
UniProt:
A0A4P6KRN0
LinkDB
All DBs
Position
243309..243818
Genome browser
AA seq
169 aa
AA seq
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MNSTLSPVDAHRQIGTLYSEHHGWLASWLSHKLQCRDLGAELAQDTFLRILTARLPLDLR
EPRAYLTVIAKGLLISHLRRRKLEEAYLAALATLPEAAQPSPEDRLAVLETLTEIDGILD
RLPSKAKQVFLLAQLDGLCYADIGAMLDLSLSTVKRHMVLAFRRCLVAL
NT seq
510 nt
NT seq
+upstream
nt +downstream
nt
atgaactcaaccctgtcccctgtcgatgcgcatcgacaaataggcacgctctacagcgag
catcacggctggctggccagctggctcagccataagctccagtgcagggacctcggggcc
gaactggcgcaagacacgttcctgcgtatcctcactgcccgtctgcccctggatctgcgc
gagccgcgcgcatacctgacggtcatcgcgaagggcttgctcatcagccatctgcgccgc
aggaagctggaagaggcttacctggcggcgctcgccacattgcccgaggcggcccagcca
tcgccggaagaccggctggcggtactggaaacgctgaccgagatcgacggcatcctcgac
cgcttgccaagcaaggcaaagcaggtattcctgctggcccagctcgacgggctgtgctat
gccgacatcggcgcgatgctcgatctttcgctgagcaccgtcaaacgccacatggtgctg
gcgttccgccgctgcctggtggcgctgtag
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