Pseudoduganella lutea: EWM63_02705
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Entry
EWM63_02705 CDS
T10124
Name
(GenBank) LysM peptidoglycan-binding domain-containing protein
KO
K08307
peptidoglycan lytic transglycosylase D [EC:
4.2.2.29
]
Organism
plue Pseudoduganella lutea
Brite
KEGG Orthology (KO) [BR:
plue00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
plue01011
]
EWM63_02705
Enzymes [BR:
plue01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
EWM63_02705
Peptidoglycan biosynthesis and degradation proteins [BR:
plue01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
EWM63_02705
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Paralog
Gene cluster
GFIT
Motif
Pfam:
SLT
LysM
LysM1_NFP_LYK
LysM3_LYK4_5
Motif
Other DBs
NCBI-ProteinID:
QBE62029
UniProt:
A0A4P6KSE4
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All DBs
Position
655584..656945
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AA seq
453 aa
AA seq
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MRIKYISLLAALAAAPAISLAVESAVATDRVSLPLIPLSSAIKAPAPNLATPPAYATKTS
AEDPFRETDVWNRIRTGFSIPDLNNPLVTKHANWYADRPDHMARTSARASLYLFHVVTEL
EKRNMPTELALLPFIESAFNPVAVSSANAGGMWQFMPGTGRDFNLKQNAFKDDRRSVLAS
TDAALTYLQKLYDMFGDWQLALAAYNWGEGSVQKAIAKNRAAGKPTDFDSLAHLMPAETR
NYVPKLQAVKNIVANPSRFGLSLPLIRNEPYFTTVDKTSDIDLAIAAQLAELSVDEFKAL
NPQFKRPVITGGEQTQILLPKENAEKFHLNLAQWGQALSTWTTHRVSSARESIASLASKF
RTTPDVIRKANNLPSRGVLTAGSTILVPKISTSTHIDIPVDIADNATVNVADEPVAKRSN
YRKAKASNSKSKSPIKLVKARVSRDQASKKRRN
NT seq
1362 nt
NT seq
+upstream
nt +downstream
nt
atgcgaattaagtacatctccctgctggcggcactcgccgcggcaccggcgatcagcctg
gcggtagagtccgccgtggcgacggaccgagtttccctcccgctgatcccgctgtcctcc
gccatcaaggcacctgcacccaatctcgccacgccccctgcatacgccaccaagacctcc
gccgaagatcctttccgtgaaacggacgtgtggaaccgcatccgcaccggcttttcgatc
cccgacctgaacaacccgctcgtgacgaagcatgccaactggtatgccgaccgtcccgac
cacatggcccgcacgtcggcccgcgcttcgctgtacctgttccatgtggtgacggaactg
gaaaagcgcaacatgccgaccgaactggcgctgctgcctttcatcgaatcggcattcaat
ccggtggccgtatcgagcgccaacgccggcggcatgtggcagttcatgcccggcaccggc
cgcgatttcaacctgaagcagaacgccttcaaggatgaccgccgctccgtgctcgcgtcc
accgatgccgccctgacttacctgcaaaagctgtatgacatgttcggcgactggcaactg
gcgctggcggcgtacaactggggtgaaggttcggtgcagaaggccatcgcgaaaaaccgc
gccgccggcaagccgaccgatttcgacagcctggcgcacctgatgccggccgaaacccgc
aattacgtgccgaagctgcaggcggtgaagaacatcgtcgccaacccgtcccgcttcggc
ctgtcgctgccgctgatccgcaacgaaccctatttcacgaccgtcgacaagaccagcgac
atcgacctggcgattgccgcccaattggccgagctgtcggtggacgaattcaaggcactg
aacccgcagttcaagcgccccgtcattaccggcggcgagcagacccagatcctgctgcct
aaggaaaacgcggaaaaattccacctgaacctggcgcagtggggccaggcgctgtccacc
tggaccacgcaccgtgtcagcagcgcacgcgaaagcatcgcctcgctggcatcgaagttc
cgcaccaccccggatgtgatccgcaaggccaacaacctgccgtcgcgcggcgtgctgacg
gccggttcgacgatcctggtgccgaagatctccaccagcacccatatcgacatccccgtc
gacatcgccgacaacgcgaccgtcaacgtggccgacgaaccggtggccaagcgcagcaac
tatcgcaaggccaaggcgtcgaacagcaagtcgaaatcgccgatcaagctggtcaaggcg
cgcgtctcgcgcgaccaggcgagcaagaaacgcaggaactga
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