Pseudoduganella lutea: EWM63_06170
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Entry
EWM63_06170 CDS
T10124
Name
(GenBank) integration host factor subunit beta
KO
K05788
integration host factor subunit beta
Organism
plue Pseudoduganella lutea
Brite
KEGG Orthology (KO) [BR:
plue00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
plue03032
]
EWM63_06170
03036 Chromosome and associated proteins [BR:
plue03036
]
EWM63_06170
03400 DNA repair and recombination proteins [BR:
plue03400
]
EWM63_06170
DNA replication proteins [BR:
plue03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
EWM63_06170
Chromosome and associated proteins [BR:
plue03036
]
Prokaryotic type
Nucleoid associated proteins
IHF (integration host factor)
EWM63_06170
DNA repair and recombination proteins [BR:
plue03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
EWM63_06170
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
CATASP
DUF2267
Par3_HAL_N_term
Motif
Other DBs
NCBI-ProteinID:
QBE62607
UniProt:
A0A4P6KUU2
LinkDB
All DBs
Position
complement(1467582..1467887)
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AA seq
101 aa
AA seq
DB search
MTKSELINRLAERYSQLVAKDAEYAVKTILDAMTGALSAGQRIEIRGFGSFALNSRPPRI
GRNPKSGDKVMVPEKRVPHFKPGKQLRERVDAMVGQPIIED
NT seq
306 nt
NT seq
+upstream
nt +downstream
nt
atgaccaagtccgaactgatcaaccgcctggctgagcgttattcgcagctggtggccaag
gatgcggagtatgccgtgaagaccattctcgacgcgatgaccggtgccctgtcggccggc
cagcgcatcgagatccggggcttcggcagctttgccctgaacagccggccaccgcgcatc
ggccgcaatccgaagtctggcgacaaggtgatggtgcccgaaaaacgggtaccgcatttc
aagccgggcaagcagttgcgcgagcgcgtggacgcgatggtcgggcaaccgatcatcgag
gactga
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integrated database retrieval system
