Pseudoduganella lutea: EWM63_08600
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Entry
EWM63_08600 CDS
T10124
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
plue Pseudoduganella lutea
Pathway
plue03420
Nucleotide excision repair
plue03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
plue00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
EWM63_08600
03430 Mismatch repair
EWM63_08600
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
plue03400
]
EWM63_08600
Enzymes [BR:
plue01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
EWM63_08600
DNA repair and recombination proteins [BR:
plue03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
EWM63_08600
MMR (mismatch excision repair)
Other MMR factors
EWM63_08600
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
AAA_12
Viral_helicase1
AAA_30
Motif
Other DBs
NCBI-ProteinID:
QBE63024
UniProt:
A0A4P6KW55
LinkDB
All DBs
Position
2049920..2052226
Genome browser
AA seq
768 aa
AA seq
DB search
MQNLLHNLNPEQLAAVTLPPQNALILAGAGSGKTRVLTTRIAWLIQTGQVSPGGILAVTF
TNKAAKEMLARLSGMMPINTRGMWIGTFHGLCNRLLRTHYRDAALPQSFQILDTQDQLSM
IKRLLKANNVDDEKFPPKSVMYFINNNKDQGLRASQVEAYDANERKLAELYQLYDDQCQR
EGVVDFAELLLRTYELLSRNQPLREHYQQRFRHILVDEFQDTNNLQYAWLKLIAGHGTGH
GGALFAVGDDDQSIYAFRGANVGNMAAFESEFSVKNLIKLEQNYRSHGHILDAANVLIAN
NSRRLGKNLRTDAGHGEPVRVYEATSDLQEAQWLVDEAKNLIGEGTRRSEIAVLYRSNAQ
SRVIEHALFSAGIPYTVYGGLRYFQRAEVKHAIAYLQLMDNPHNDSAFLRVVNFPARGIG
ARTLEQLQNAAEAYGISMYAAVPYMVGKAGTSLGGFVKLIEGVRFETQQMALPELVRITL
EASGLLQHYANEKEGADRVENLEQMVSAATQFVGEEGYGQGAPAHLGPAAEAQAGAAIIN
ADGVEIMDADAPLSTVMSPLSAFLAHASLEAGDNQAQAGQDAMQLMTVHSAKGLEFDNVF
ITGLEEGLFPHESSSKEEGGVEEERRLMYVAITRARKRLYMCFCQTRMLHGQTRYNMKSR
FFDELPEESLKWLSPRVQAHWFANKKAQWEDVQLNGGSDNAIAQRIAQKSTGGSGWRIGE
SVSHAKFGEGVIVNIEGSGANCRAQINFGSAGMKVLDLSVAKLERLGR
NT seq
2307 nt
NT seq
+upstream
nt +downstream
nt
atgcagaatctcctccacaacctcaatcccgaacaactcgccgccgtcaccctgccgccg
caaaacgccctgatcctggcgggcgccggctcgggcaagacgcgcgtgctgactacgcgc
atcgcctggctgatccagaccgggcaggtgtcgccgggcggcatcctggccgtcacgttc
acgaacaaggcggccaaggaaatgctggcgcgcctgtcgggaatgatgccgattaataca
cgcggcatgtggatcggcacgttccatggcctgtgcaaccgcctgctgcgcacccactac
cgcgatgccgccctgccccagtcgttccagatcctcgacacgcaagaccagctgtcgatg
atcaagcgcctgctgaaggccaacaatgtcgacgatgaaaaattcccgccgaaatcggtg
atgtatttcatcaacaacaacaaggaccagggcctgcgcgccagccaggtcgaagcgtac
gacgcgaacgaacgcaagctggccgagctgtaccagctgtacgacgaccagtgccaacgc
gaaggcgtggtcgacttcgccgaactgctgctgcgcacctacgaactgctgtcgcgcaac
cagccactgcgcgagcattaccagcagcgcttccgccacatcctcgtcgacgagttccag
gatacgaacaacctgcaatacgcgtggctgaaactgatcgccggccatggcaccggccac
ggcggcgcgctgttcgccgtgggcgacgacgaccagagcatctatgcgttccgcggcgcg
aacgtgggcaacatggcggcgttcgagtccgagttcagcgtgaagaacctgatcaagctc
gaacagaactaccgctcgcacggccacatcctcgatgcggcgaacgtactgatcgcgaac
aacagccgccgtctgggcaagaacctgcgcacggacgcgggtcacggcgaaccggtgcgc
gtgtacgaagccacgtccgacctgcaggaagcgcaatggctcgtcgacgaagcaaagaac
ctgatcggcgaaggcacgcggcgcagcgagatcgccgtgctgtaccgctcgaacgcgcaa
tcgcgcgtcatcgagcatgcgctgttctcggccggcattccgtacacggtgtacggcggc
ctgcgctacttccagcgcgccgaggtgaagcacgcgatcgcctacctgcagctgatggac
aatccgcacaacgattcggccttcctgcgcgtggtgaatttcccggcacggggcatcggc
gcgcgcacgctggagcagttgcagaatgcggccgaagcctatggcatctcgatgtatgcg
gcggtgccctacatggtgggcaaggccggcacgtcgctgggcggcttcgtgaaactgatc
gagggcgtgcgcttcgaaacgcagcagatggcgctgccggaactggtgcgcatcacgctg
gaagcatccggcctgctgcagcactatgccaacgaaaaggaaggcgccgaccgggtggaa
aacctggagcagatggtcagcgcggccacccagttcgtgggcgaggaaggctatggccag
ggtgcgcccgcgcacctgggcccggcggccgaagcccaggcgggcgcggcgatcatcaat
gccgacggcgtggaaatcatggatgctgacgcgccgctgtcgaccgtgatgtcgccgctg
tcggcattcctcgcgcatgcgtcgctcgaagcgggcgacaaccaggcgcaggccggccag
gatgcgatgcagctgatgacggtgcactcggccaagggcctcgaattcgacaatgtgttc
atcaccggccttgaagaaggcctgttcccgcacgagagcagctcgaaggaggaaggcggc
gtcgaggaagaacggcggctgatgtacgtggccattacccgggccaggaagcgcctgtac
atgtgcttctgccagacacgcatgctgcacgggcaaacacgctacaacatgaagtcgcgc
ttcttcgacgaattgccggaggaatcgctgaagtggctgtcgccgcgcgtgcaggcgcac
tggttcgccaacaagaaggcacagtgggaagacgtgcagctcaatggcggcagcgacaac
gcgatcgcccagcgcatcgcgcagaaatccaccggcggctccggttggcgcatcggcgaa
tccgtttcgcacgccaagttcggcgaaggcgtgatcgtcaacatcgagggcagcggtgcc
aattgccgcgcgcagatcaacttcggcagcgccggcatgaaggtgctggacctgtcggtg
gcgaagctggagcggctggggcgatag
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