KEGG   Pseudoduganella lutea: EWM63_10495
Entry
EWM63_10495       CDS       T10124                                 
Name
(GenBank) RNA polymerase factor sigma-54
  KO
K03092  RNA polymerase sigma-54 factor
Organism
plue  Pseudoduganella lutea
Pathway
plue02020  Two-component system
plue02040  Flagellar assembly
Brite
KEGG Orthology (KO) [BR:plue00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    EWM63_10495
 09140 Cellular Processes
  09142 Cell motility
   02040 Flagellar assembly
    EWM63_10495
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:plue03021]
    EWM63_10495
Transcription machinery [BR:plue03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     EWM63_10495
SSDB
Motif
Pfam: Sigma54_DBD Sigma54_CBD Sigma54_AID HTH_38 Xre-like-HTH HTH_IclR
Other DBs
NCBI-ProteinID: QBE63338
UniProt: A0A4P6KYG0
LinkDB
Position
complement(2481410..2482885)
AA seq 491 aa
MKQSLQLRTSQHLALTPQLQQSIRLLQLSTLELHQELEQLLTDNPLLERLDDPLDRSVRL
LGDGAINTTQAPGEAPPEGGPPQDAPAAPEPEPYEGGEGEGLDPGAGDTDWSSAGSGKGP
DDDDGRPQLEASHRSLREHLMEQMRVTVLEPRDRALVELIIDALDDNGYLEESLEDIHAR
MPEELEIEFDELRTALKLLQSFDPAGIGARNASECLALQIRRMPGVPLVTRRMALCIVEK
HLQWFAQRDFNKLKKALDCDDEDLREAQAVIRQCNPHPGAAFAADVSDYVVPDVVVRKGR
NGWIVTLNNDVMPRLRVNALYASLLKQGKGETQMNAQLQEAKWLIKNMRQRFDTILRVAQ
AIVERQKNFFSHGAVAMRPLVLREIADTLGLHESTISRVTTQKYMLTPHGMFELKYFFGS
HVATEAGGEASSTAIRALIVQFTGAEDPKNPLSDSKIADMLGEQGMVIARRTVAKYREAL
KIPPVSLRKSL
NT seq 1476 nt   +upstreamnt  +downstreamnt
atgaaacagtccttgcaactgcgcacttcccagcacctcgcgctgacgccgcaattgcag
cagtcgatccggctgctgcaattgtccacgctggagctgcaccaggaactcgaacagctg
ctgaccgataatccgctgctcgagcggctcgacgatccgctcgaccgttccgtgcgcctg
ctgggcgatggggcgatcaacaccacgcaggcgccgggcgaggcgccgcccgaaggcggc
ccgccgcaggatgcgccggccgccccggaaccggagccctacgagggcggcgaaggcgaa
ggcctcgaccccggtgccggcgataccgactggagcagtgcgggcagtggcaagggaccg
gacgacgacgatggccgcccccagctcgaggcaagccatcgcagcctgcgcgaacacctg
atggagcagatgcgcgtgacggtgctggagccgcgcgaccgcgccctggtggagctgatc
atcgatgcgctcgacgataacggttacctcgaggagagcctggaagatatccatgcgcgc
atgccggaagagctggagatcgagttcgacgaattgcgcaccgcgctgaagctgctgcag
agctttgatccggccggcatcggtgcgcgcaacgcttccgaatgcctggcgctgcagatc
cgccgcatgccgggcgtgccgctggtcacgcggcggatggcgctgtgcatcgttgaaaaa
cacttgcagtggtttgcgcagcgcgacttcaacaagctgaagaaggcactcgattgcgac
gatgaagacttgcgcgaagcgcaagcggtgattcggcagtgcaatccgcatccgggcgcc
gccttcgcggccgacgtgtcagactatgtcgtaccggatgtcgtggtgaggaaaggacgc
aatggctggatcgtcacgctcaacaatgacgtgatgccccgcctgcgcgtgaatgcgctg
tatgccagcctgctcaaacagggcaagggcgaaacgcagatgaatgcgcagctgcaagaa
gccaagtggctgatcaagaatatgcgccagcgctttgacacgatcctgcgcgtggcccag
gccatcgtcgagcggcaaaagaactttttctcgcatggcgcggtggcaatgagacccctt
gtgttgcgtgaaatagctgatacactgggtcttcacgagagtactatctctcgggtaaca
actcaaaaatatatgctcaccccgcatggcatgtttgagttgaagtatttttttggcagc
cacgtcgcaaccgaagctggtggggaagcttcctcgactgcgatccgggcgctgatcgtg
caattcacaggagccgaagacccgaagaaccctttatccgacagtaagattgcggacatg
ctgggtgaacaaggcatggtgattgcgcgacgcactgttgccaaatatcgcgaagcattg
aaaattcccccagtcagcctccgcaagtccttgtaa

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