Pseudoduganella lutea: EWM63_12435
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Entry
EWM63_12435 CDS
T10124
Name
(GenBank) long-chain fatty acid--CoA ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
plue Pseudoduganella lutea
Pathway
plue00061
Fatty acid biosynthesis
plue00071
Fatty acid degradation
plue01100
Metabolic pathways
plue01212
Fatty acid metabolism
plue02024
Quorum sensing
plue04146
Peroxisome
Module
plue_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
plue00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
EWM63_12435
00071 Fatty acid degradation
EWM63_12435
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
EWM63_12435
09145 Cellular community - prokaryotes
02024 Quorum sensing
EWM63_12435
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
plue01004
]
EWM63_12435
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
plue04147
]
EWM63_12435
Enzymes [BR:
plue01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
EWM63_12435
Lipid biosynthesis proteins [BR:
plue01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
EWM63_12435
Exosome [BR:
plue04147
]
Exosomal proteins
Exosomal proteins of breast milk
EWM63_12435
Exosomal proteins of breast cancer cells
EWM63_12435
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C_3
Motif
Other DBs
NCBI-ProteinID:
QBE63683
UniProt:
A0A4V0Z3J7
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All DBs
Position
2961500..2963446
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AA seq
648 aa
AA seq
DB search
MDAIPETFPRLLLEHGRVRPHKCAYREKYLGIWQAWTWAQVNDEVRALACGLAALGFTRG
MNLAIIGDNRPRLYWAMLAAQCLGGVPVPLYQDAPAADMAYVLENAEIRYAIVEDQEQVD
KLLELQADYPGIEHIVYDDERGMRHYRQGELVSYARLQETGRAWDRDNPGFYEAALAAGG
GADNAIILYTSGTTGKPKGVCQTHAALIAAGTGGTGFEHLTDVENVLSYLPMAWVGDCLF
SFAQALVAGFTVNCPESAETVTIDLREIGPSYYFAPPRIFEGMLTQVMIRMEDAGAIKRR
MFDHFMAVARRVGADILDGRPVPAVDRLRYALGDLLVYGPLKNVLGLSRVRVAYTAGAAI
GPDLFRFYRSIGINLKQFYGSTETCAYICLQPNGQIKFDSVGMAAPGVDVKLAENGEVLV
KSPTLMSGYYKRPEATVEAIDPQGWFHTGDAGIFDAEGHLKIIDRAADVGRLNGGAIFAP
NYIENKLKFFPFIKEAVAFGNGHDTVCAFLNIDMEAVGNWAERRNIAYAGYTDLASHPDV
YALMADCVEKVNADLAADAAMSDTQVHRFLVLHKELDPDDDELTRTRKVRRKFIAEKYRV
LIDALYAGRTSQYIETQVKFEDGRTGIVAADLRIADSHVVPPHVRRAA
NT seq
1947 nt
NT seq
+upstream
nt +downstream
nt
atggacgcaataccggagacattcccccgcctgctcctcgagcatggacgggtccggccg
cacaagtgcgcgtaccgggagaagtacctgggcatctggcaagcctggacctgggcccag
gtcaacgatgaagtgcgggcactggcctgcggcctggccgcgctgggttttacacgcggc
atgaacctggccatcatcggcgacaaccggccgcgcctgtactgggcgatgctggccgcg
cagtgcctgggcggcgtgcccgtgccgctgtaccaggacgcccccgcggcggacatggcc
tacgtgctggagaacgccgagatccgctacgcgatcgtcgaagaccaggagcaggtcgac
aagctgctcgaactgcaggcggactatcccggcatcgaacacatcgtctacgacgacgag
cgcggcatgcgccattaccgccagggcgaactggtctcgtatgcgcgcctgcaggaaacg
ggtcgtgcctgggaccgggacaaccccggtttctacgaagcggcgctggcggcgggcggc
ggtgcggacaacgcgatcatcctgtacacctcgggcaccaccggcaagccgaaaggcgtg
tgccagacccatgcggcgctgatcgcggccggcaccggcggtaccggcttcgagcatctg
acggatgtggagaacgtgctgtcctacctgcccatggcgtgggtcggcgactgcctgttc
tcgtttgcccaggcactcgtggcgggcttcaccgtgaattgcccggaatcggcggaaacg
gtcacgatcgacctgcgcgagatcggtccgtcgtactacttcgcgccgccacgcatcttc
gaaggcatgctgacccaggtgatgatccgcatggaggacgcgggcgcgatcaagcgccgc
atgttcgatcacttcatggcggtggcgcgccgcgtgggtgccgatatcctcgacggccgc
ccggtgccggccgtggaccggctgcgctacgcgctcggcgacctgctcgtgtacgggccc
ctgaagaacgtgctgggcctgtcgcgggtgcgcgtcgcctacacggccggcgccgcgatc
gggcccgacctgttccgcttctaccgctcgatcggcatcaacctgaagcagttctacggt
tccaccgaaacctgcgcctatatctgcctgcagccgaatggccagatcaagttcgacagc
gtcggcatggccgcgccgggcgtggacgtgaagctggccgagaacggcgaagtgctggtc
aagtcgcccacgctgatgagcggctactacaagcgcccggaggccaccgtggaggcgatc
gatccgcaagggtggttccacacgggcgatgccggcatcttcgatgccgaaggccacctc
aagatcatcgatcgcgcggcggatgtggggcgcctgaacggcggcgcgatcttcgccccg
aactacatcgagaacaagctgaaattcttccccttcatcaaggaggccgttgcgttcggc
aacggccacgataccgtatgcgccttcctgaacatcgacatggaagcggtcggcaactgg
gccgaacggcgcaatatcgcctatgccggctacaccgacctggccagccacccggacgtg
tatgcgctgatggccgactgcgtggaaaaggtcaacgccgacctggccgccgatgcggcg
atgagcgacacgcaggtgcaccgcttcctcgtgctgcacaaggagcttgatccggacgac
gatgaactgacacgcacgcgcaaggtgcgccgcaagttcatcgccgagaaataccgcgtg
ctgatcgatgcgctgtatgcgggccgcacgtcgcagtacatcgaaacgcaggtgaaattc
gaggatggccgcacgggcatcgtggcggccgacctgcgcattgccgacagccacgtcgtg
ccaccgcacgtgcggcgcgcggcatga
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