Pseudoduganella lutea: EWM63_16835
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Entry
EWM63_16835 CDS
T10124
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
KO
K02667
two-component system, NtrC family, response regulator PilR
Organism
plue Pseudoduganella lutea
Pathway
plue02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
plue00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
EWM63_16835
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
plue02022
]
EWM63_16835
02035 Bacterial motility proteins [BR:
plue02035
]
EWM63_16835
Two-component system [BR:
plue02022
]
NtrC family
PilS-PilR (type 4 fimbriae synthesis)
EWM63_16835
Bacterial motility proteins [BR:
plue02035
]
Pilus system
Twitching motility proteins
EWM63_16835
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Response_reg
Sigma54_activ_2
AAA_lid_14
HTH_8
HTH_28
AAA_5
AAA_22
HTH_23
Motif
Other DBs
NCBI-ProteinID:
QBE64444
UniProt:
A0A4P6KZT3
LinkDB
All DBs
Position
3959887..3961371
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AA seq
494 aa
AA seq
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MSHSPRGAPRVSPRVLVVDDEDDLRDLLEITLLKMGLDVDGAADLKSARALLAAHDHDLV
LTDMRLPDGLGLDLVREIAASGRNLPVAVVTAFGSAENAVVALKAGAFDYVTKPLQLDQL
RLMVQSALKLNVPSGPAVPSAEPVDSRLKGQSAAMQALRAQIARLARSMAPIAITGESGS
GKELAAREIHAQGARADKPFIAVNCGAIPEALMEAEFFGYRKGAFTGAADERDGFFQAAN
GGTLMLDEVADLPLPMQVKLLRAIQERRVRKIGATAEEPVDVRIVSATHQDLARCVEQGK
FRQDLFYRLNVIELSLPPLRERLDDLPVLTEAILARLSAAGGQPATLGPGVLDALRGYSF
PGNVRELENILERALAFSNDGVIEVADLALKGARLAEAPAASAVAAVPAPPATAAEVALS
PAAVPAGERMPPLPDLSVLPSNLPAYLERVEREIIVRALDQTQYNRTQAAQLLGISFRQL
RYQMQKLGIQEPEG
NT seq
1485 nt
NT seq
+upstream
nt +downstream
nt
atgagccattcaccccgcggcgccccgcgcgtttcgcctcgtgtcctggtcgtcgacgat
gaagacgacctgcgcgacctgctggagatcacgctgctgaagatggggctggacgtggac
ggcgccgccgacctgaaaagcgcccgcgcgctgctggcggcccatgaccatgacctcgtg
ctgaccgacatgcgcctgccggacggcctgggcctggacctggtgcgcgaaatcgccgcc
agcggccgcaacctgccggtggccgtggtgaccgcattcggcagcgcggaaaacgccgtg
gtggcactcaaggccggcgcattcgattacgtgacaaagccgctgcagctcgaccagctg
cgcctgatggtgcagtcggcattgaagctgaacgtgccatccgggcccgccgtgccgagc
gcggaaccggtggacagccgcctgaaggggcaatcggcggccatgcaggcgctgcgcgcg
cagatcgcccggctggcccgctcgatggcgccgatcgcgatcaccggcgaatcgggctcc
ggcaaggaactggcggcccgcgaaatccacgcgcagggcgcgcgcgccgacaagccgttc
atcgccgtcaattgcggcgcgatccccgaggcgctgatggaggccgagttcttcggctac
cgcaagggcgccttcacgggcgcggcggacgaacgcgacggcttcttccaggccgccaac
ggcggcacgctgatgctcgacgaagtggcggacctgccgttgccgatgcaggtgaagctg
ctgcgcgcgatccaggagcggcgcgtgcgcaagatcggcgccaccgccgaggagccggtg
gacgtgcgcatcgtcagcgccacgcaccaggacctggcgcgctgcgtggagcagggcaag
ttccggcaagacctgttctaccggctgaacgtgatcgaactgtcgctgccgccgctgcgc
gagcggctcgacgacctgccggtcctgacggaagcgatcctggcgcgcctgtccgccgcg
ggcggccagccggccacgctggggccgggcgtgctcgacgcgctgcgcggctacagcttc
cccggcaatgtacgcgagctggaaaatatcctggagcgcgcgctggcgttttccaacgat
ggcgtgatcgaggtggccgacctggcgctgaagggggccaggctggccgaggcgcccgcg
gcgtccgcggtcgcagcggtgcccgcgccgcccgcaacggctgccgaggtggccttgtcg
cctgccgccgtgccggccggcgagcggatgccgccgctacccgatttatcggtactcccc
tcaaacctgccggcctacctcgagcgggtcgagcgcgagatcatcgtgcgcgccctcgac
cagacccagtacaaccgcacccaggccgcgcaactgctcggcatcagtttccggcagctg
cgctaccagatgcagaaactgggcatccaggagcccgaaggctga
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