Pseudoduganella lutea: EWM63_16955
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Entry
EWM63_16955 CDS
T10124
Name
(GenBank) RNB domain-containing ribonuclease
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
plue Pseudoduganella lutea
Brite
Enzymes [BR:
plue01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
EWM63_16955
Transfer RNA biogenesis [BR:
plue03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
EWM63_16955
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Other DBs
NCBI-ProteinID:
QBE64468
UniProt:
A0A4P6L193
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Position
3985597..3987663
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AA seq
688 aa
AA seq
DB search
MNVFFEESGDFKVGSVLSTAGEAYQVEMASGKRSKVKAKDVLLQYEKPAPEELLEQARAV
AADVDLDFLWEVAGQEEFGFAELGAEYFGHAPLPAEAAGLILALHTAPVYFHKKGRGRYK
AAPEQTLKAALAGIEKKKQQAIVQQGYVDELKADRLPPSMAGIVHQLLFKPDKNTIEYKA
LEAACNELHTTPARLMLAVGGIGSAKDLHMAKFLFESFPRGHGFPEVTVPQPPANLPVAD
VEAFSIDDVTTTEIDDAISIVHLDDGKVRIGIHIAAPGLAIRPDDAIDKIARARLSTVYM
PGDKITMLPDAVVDAYTLAEGKTCPALSLYATLDMADWTVVSTETRAEMVPIANNLRHND
LDDVVNEETLASGEGDYPRKAELTLLWGWAQHLEAGRMAKREAFGLRPEQNNRVDFNFYV
EDDVVTITRRKRGAPLDKIVAELMIFANSTWGKLMHDHGVPGIYRSQGRGVGGWNAKMQV
RMLTHAAPHEGLGVDQYAWSTSPLRRYTDLVNQWQILAVAEKGVMAPLVAPFKHKDANLF
AIVSAFDAAYAAYADFQANMERYWCLRWLGQEDKHQVEAVVLKDEVLRLTDIPLVIRLPG
MPSAPRGAAVKLDVLRWDEVDLSIETRLLEIEAAAPAAVDFEEDEEEDKTLAGETVPELV
PDPDQPADEKVEVAEAADDVDAAPPAAV
NT seq
2067 nt
NT seq
+upstream
nt +downstream
nt
atgaatgtcttttttgaagaatccggcgatttcaaggtcggaagcgtgctgtccaccgcc
ggcgaggcttaccaggtggagatggccagcggcaagcgcagcaaggtaaaggccaaggac
gtgctgctgcagtacgagaagccggcgcccgaggagctgctcgagcaggcgcgcgcggtg
gcggccgatgtcgacctggatttcctgtgggaggtggcgggccaggaagaattcggtttc
gcggaactgggcgccgagtacttcggccatgcgccgctgccggccgaggcggccggcctg
atcctggcgctgcacacggcgcccgtgtacttccacaagaagggccgcgggcgctacaag
gccgcgcccgagcagaccctgaaagcggcgctggccggcatcgagaaaaagaagcagcag
gcaatcgtccagcagggctacgtggacgagctgaaggccgaccgcctgcccccttccatg
gcgggcatcgtgcaccagctgctgttcaagccggacaagaacacgatcgaatacaaggcg
ctggaggcggcgtgcaatgaattgcacaccacgccggcgcggctgatgctggccgtgggc
ggcatcgggtccgccaaggacctgcacatggcgaagttcctgttcgagtcgttcccgcgc
gggcatggcttcccggaggtgacggtgccgcagccgccggccaacctgccggtggccgac
gtggaagccttctcgatcgacgacgtgaccaccaccgagatcgacgatgcgatctcgatc
gtccacctggacgacggcaaggtgcgcatcggcatccacatcgcggcgccggggctggcc
atccgcccggacgatgcgatcgacaagatcgcgcgcgcgcggctgtccaccgtctatatg
ccgggcgacaagatcacgatgctgccggatgccgtcgtcgacgcatacacgctggccgag
ggcaagacgtgcccggcgctgtcgctgtatgccacgctcgacatggccgactggaccgtg
gtctcgaccgagacgcgggccgagatggtgccgatcgcgaacaacctgcgccacaacgac
ctcgatgacgtggtgaatgaagaaaccctcgccagtggcgagggcgactatccgcgcaag
gccgagctgaccttgctgtggggctgggcgcagcacctggaagcggggcggatggccaag
cgcgaggcgttcggcctgcggccggagcagaacaaccgcgtcgacttcaacttctacgtg
gaagacgacgtggtcacgatcacgcgccgcaagcgcggcgcgccgctcgacaagatcgtg
gccgagctgatgatcttcgccaacagcacgtggggcaagctgatgcatgaccacggcgtg
ccgggcatctaccgcagccagggccgcggcgtgggcggctggaacgcgaagatgcaggtg
cgcatgctgacgcacgcggcgccgcacgaaggcctcggtgtcgaccagtatgcctggagc
acgtcgccgctgcgccgctatacggacctggtcaaccagtggcagatcctggccgtggcc
gagaagggcgtgatggcgccgctcgttgcgccgttcaagcacaaggatgcgaacctgttc
gcgatcgtctccgcgttcgacgccgcatatgccgcgtatgccgacttccaggccaatatg
gaacgctactggtgcctgcgctggctgggccaggaagacaagcaccaggtcgaggccgtg
gtgctgaaggatgaagtgctgcgcctgaccgacatcccgctcgtgatccggctgcccggc
atgccatcggccccgcgcggcgccgccgtcaagctcgacgtgctccgttgggacgaagtc
gacctgtcgatcgaaacgcgcctgctggaaatcgaggcagcggctcccgctgccgtcgac
ttcgaggaagacgaggaagaggacaagacgctggccggcgaaaccgtgccggaactggta
cccgatcccgaccagccggccgacgagaaggtggaagtggccgaggctgccgacgacgtc
gacgccgcgccccccgccgctgtgtaa
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