KEGG   Pseudoduganella lutea: EWM63_17835
Entry
EWM63_17835       CDS       T10124                                 
Name
(GenBank) DNA polymerase III subunit alpha
  KO
K02337  DNA polymerase III subunit alpha [EC:2.7.7.7]
Organism
plue  Pseudoduganella lutea
Pathway
plue03030  DNA replication
plue03430  Mismatch repair
plue03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:plue00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    EWM63_17835
   03430 Mismatch repair
    EWM63_17835
   03440 Homologous recombination
    EWM63_17835
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:plue03032]
    EWM63_17835
   03400 DNA repair and recombination proteins [BR:plue03400]
    EWM63_17835
Enzymes [BR:plue01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     EWM63_17835
DNA replication proteins [BR:plue03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     EWM63_17835
DNA repair and recombination proteins [BR:plue03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     EWM63_17835
SSDB
Motif
Pfam: DNA_pol3_alpha DNA_pol3_finger PHP HHH_6 tRNA_anti-codon DNA_pol_IIIA_C
Other DBs
NCBI-ProteinID: QBE64620
UniProt: A0A4P6KZU8
LinkDB
Position
4192805..4196353
AA seq 1182 aa
MSNEILDQQVIQPDEPAAPPGPDFVHLRVHSEYSIVDGLVRIDDLVKAAVKDKQGALAIT
DLSNLFGMVKFYKSARGKGIKPVIGCDVWITNDDNREKPSRLLLLAKNRVGYLQLCELLS
MAWLTNQYKGRAELRTEWLQALKDQAYDVMPGESGANGLIALSGAQFGDIGCAIDNGNLE
LAEKHAQKWSAIFPGHFYIEIQRAGQPNQEAQVRQSVALAARLRLPVVATHPVQFMSEHE
FIAHEARICIAEGEMIANARRPKRFNEQMRFMTQEEMAILFEDLPAALANSVEIAKRCNV
TLTLGKPQLPNFPTPGMTIDEFLVAETKKGLEERLVQLFPDPVYREKMRPRYEERLAFEN
NTIINMKFPGYFLIVAEFIQWGKNNGVPIGPGRGSGAGSLVAYALKITDLDPLKYNLLFE
RFLNPERVSMPDFDIDFCQEKRELVIQHVKDLYGRDAVSQIATFGTMAAKGAIRDVGRVL
DFGYNFCDGISKLIPFKPGKPVTIAEAIEEEPLLKERLENEEEVKQLLDLAQQVEGITRG
IGMHAGGVLIAPGKLTDFCPLYTQSGDTGVVSQYDKDDVEAVGLVKFDFLGLTTLTILDR
AVNYIRELDPADKDFNLESLPLDDRGSYDLLTKAKTVAVFQLESRGMQGMLKDARPDRFE
DIIALVALYRPGPMDLIPDFCKRKHGEKFDYPDPRTEGILSETYGIMVYQEQVMQMAQII
GGYSLGGADMLRRAMGKKKAEEMAEHREIFRKGAGERGLTTEKADEIFDLMEKFAGYGFN
KSHAAAYALLSYHTAYLKQHHTAAFMAANMSLTMDDTEKVKILVEDSIEVCGLTILPPDV
NLSAYRFRPDGAPRSVTGKKVTNIRYGLGGVKGAGQNAIEAIIAAREADGPFKSLFDFCK
RVDKRQINRRTIEALIRSGAFDSLGVERSVLFASVGFAMECAEQELKAANQVSLFGGDDS
DLVAPPEYVQATAWTDRQKLAEEKIALGFYLSGHMFDSYAAEARRFARTKLSELEPSREP
RMMCGVITGIRTQMTQRGKILIVSLDDKSAVVEVTVYNEIFEANKKAFKEDEFLAVTGKV
SEDRFTGGLRISAEKVYDIVSARLQFGRQMGWLLPSSVPPAKLQEVLAPHRDDYGLPVQM
RIRPQGIDCTLQLGDDWRVAPSDELTLALEQVLGAKDVAVEY
NT seq 3549 nt   +upstreamnt  +downstreamnt
atgagcaacgaaatcctcgaccagcaagtcatccaacccgacgaaccggcagccccgcca
ggcccggatttcgttcacctgcgggtgcactcggagtactcgatcgtcgatggcctggtg
cgtatcgacgacctggtcaaggccgccgtgaaggacaagcagggtgcgctggccatcacc
gacctgtcgaacctgttcggcatggtgaagttctacaagagcgcgcgcggcaagggcatc
aagcccgtgatcggctgcgacgtgtggatcaccaatgacgacaaccgcgaaaaaccgagc
cgcctgctgctgctggcgaagaaccgcgtgggctacctgcagctgtgcgaactgctgtcg
atggcatggttgacgaaccagtacaagggccgcgccgagctgcgcaccgagtggctgcag
gcgttgaaggaccaggcctatgacgtgatgcccggggaaagcggcgccaacggcctgatc
gcgctgtccggcgcgcagttcggcgatatcggctgcgcgatcgacaacggcaacctggag
ctggccgaaaagcatgcgcaaaaatggtcggccatcttcccgggccatttctatatcgag
atccagcgcgccggccagccgaaccaggaggcgcaggtgcgccagtccgtggcgctggcc
gccaggctgcgcctgccggtggtggccacgcacccggtgcagttcatgtccgagcacgaa
ttcatcgcgcacgaggcgcgcatctgtatcgccgaaggcgaaatgatcgccaacgcgaga
cggccgaagcgcttcaacgagcagatgcgcttcatgacccaggaggaaatggcgatcctg
ttcgaggatctgccggccgcgctggcaaactccgtggaaatcgccaaacgctgcaacgtc
acgctcacgctgggcaagccgcagctgccgaacttccccacgccgggcatgacgatcgac
gaattcctcgtggccgagacgaagaagggcctggaagagcgactggtgcaattgttcccg
gacccggtgtatcgcgagaagatgcgcccgcgctacgaggagcggctggcgttcgagaac
aacacgatcatcaacatgaagttccccggttacttcctgatcgtggcggagttcatccag
tggggcaagaacaacggcgtgccgatcggccccggccgcggctcgggcgcgggttccctc
gtggcgtatgcgctgaagatcaccgacctcgatccgctgaagtacaacctgctgttcgag
cgtttcctgaacccggaacgggtatcgatgcccgacttcgacatcgacttctgccaggag
aaacgcgagctggtgatccagcacgtgaaggacctgtacggccgcgatgccgtatcgcag
atcgccaccttcggcaccatggcggcaaagggcgcgatccgcgacgtgggccgcgtgctg
gacttcggctacaacttctgcgacggcatctcgaagctgattccgttcaagccgggcaag
ccggtgacgatcgccgaggcgatcgaggaggagccgctgctcaaggaacgcctcgagaac
gaggaggaagtgaagcagctgctggacctggcgcagcaagtggaaggcatcacccgcggc
atcggcatgcacgccggcggcgtgcttattgcgccgggcaagctgaccgacttctgcccg
ctgtacacgcagtccggcgacacgggcgtcgtgtcgcagtacgacaaggatgacgtggag
gccgtgggcctggtgaagttcgacttcctggggttgaccacgctgacgatcctcgaccgc
gcggtgaactacatccgcgagctggacccggccgacaaggacttcaacctggaatcgctg
ccgctggacgaccgcggttcctacgacctgctgaccaaggcgaagacggtggccgtgttc
cagctggagtcgcgcggcatgcagggcatgctcaaggacgcgcgccccgaccgcttcgag
gacatcatcgcgctggtggcgctgtaccgcccgggcccgatggacctgattccggacttc
tgcaagcgcaagcacggcgaaaagttcgactatccggacccgcgcacggaaggcatcctg
tccgagacctacggcatcatggtctaccaggagcaggtgatgcagatggcgcagatcatc
ggcggctactcgctcggcggcgcggacatgctgcgccgcgcgatgggcaagaagaaggcc
gaggagatggccgagcaccgcgagatcttccgcaagggtgctggcgagcgcgggctcacc
accgagaaggccgacgagatcttcgacctgatggaaaagttcgcgggctacggtttcaac
aaatcgcacgccgccgcctacgccctgctgtcgtatcacaccgcgtacctgaagcagcac
cacacggccgcgttcatggcggccaacatgtcgctgacgatggacgacacggaaaaggtc
aagatcctcgtcgaggattcgatcgaggtgtgcggcctgacgatcctgccgccggacgtg
aacctgtcggcctaccgcttccggcccgatggcgcgccgcgctccgtcaccggcaagaag
gtgacgaacatccgctatggcctgggcggcgtcaagggcgccggccagaacgccatcgag
gcgatcatcgccgcgcgcgaagccgatggcccgttcaagagcctgttcgacttctgcaag
cgcgtggacaagcgccagatcaaccgccgcacgatcgaggcactgatccgctccggcgcg
ttcgactcattgggggttgagcgctccgtgctgtttgcctcggtggggtttgccatggaa
tgcgccgagcaggaactgaaggccgccaaccaggtcagcctgttcggcggcgacgacagc
gacctggtcgccccgcccgaatacgtgcaggccactgcatggaccgaccgccagaaactg
gccgaggaaaagatcgcgctgggcttttacctgtcgggccacatgttcgattcgtatgcg
gccgaggcacggcgctttgcccgcaccaagctctccgagctggaaccgtcgcgggaaccg
cgcatgatgtgcggcgtgatcaccggcatccgcacgcagatgacccagcgcggcaagatc
ctcatcgtgagcctggacgacaagagcgccgtggtggaagtcaccgtctacaacgagatc
ttcgaggccaacaagaaagcgttcaaggaggacgagttcctggccgtgaccggcaaggta
tcggaagaccgcttcacgggcggcctgcgcatctcggccgagaaggtgtacgacatcgtt
tccgcgcgcctgcagttcggccggcagatgggctggctgctgccctcgagcgtgccgccg
gcgaagctgcaggaagtgctggcaccgcaccgcgacgactatggcttgccggtgcagatg
cgcatccggccgcagggcatcgactgcacgctgcaactgggcgacgactggcgcgtggcg
ccatcggacgaactgacgctggcgctggaacaggtactgggtgccaaggacgtggcagtc
gagtattaa

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