Pseudoduganella lutea: EWM63_23870
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Entry
EWM63_23870 CDS
T10124
Name
(GenBank) FliA/WhiG family RNA polymerase sigma factor
KO
K02405
RNA polymerase sigma factor FliA
Organism
plue Pseudoduganella lutea
Pathway
plue02020
Two-component system
plue02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
plue00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
EWM63_23870
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
EWM63_23870
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
plue03021
]
EWM63_23870
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
plue02035
]
EWM63_23870
Transcription machinery [BR:
plue03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
EWM63_23870
Bacterial motility proteins [BR:
plue02035
]
Flagellar system
Flagellar assembly proteins
Stator
EWM63_23870
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r4_2
Sigma70_r3
Sigma70_ECF
HTH_23
Motif
Other DBs
NCBI-ProteinID:
QBE65643
UniProt:
A0A4V0Z443
LinkDB
All DBs
Position
complement(5614325..5615107)
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AA seq
260 aa
AA seq
DB search
MVCAATESSAGNYGGGYAESYGESYGETYEVRAAAQALSPAAEQKHLMSYAPLVKKIVRQ
LNSQVSGAIDRDDMEQIGLMGLLEALRRYGEPDAAFGSFASLRIRGAILDELRRQDWRPR
AVRQQSHKLRDGVRALTRKLGREPTEQEAIAGLGVTADEYMAYQLDESAETLASFDDLLQ
EGAADGSAGSSPSPEEQLMVRRSLEQALSGLNEREQRVVQMYYEFELSYKEIAAVLDLTD
ARVCQLNKAALTKMKAVLQG
NT seq
783 nt
NT seq
+upstream
nt +downstream
nt
atggtatgtgcagcaaccgaatcctccgccgggaattacggcggcggctatgccgaaagc
tacggcgaaagctatggcgaaacctatgaggtacgcgcggccgcgcaggcactgtcgcct
gcggccgagcaaaagcacctgatgtcgtatgcgccgctggtgaagaagatcgtgcgccag
ctgaactcgcaggtgagcggcgcgatcgaccgcgacgacatggaacagatcggcctgatg
ggcttgctcgaagcgctgcggcgctacggcgagccggatgccgctttcggcagcttcgcc
agcctgcgcatccgcggcgcgatcctcgacgagctgcgccggcaggactggcggccgcgc
gcggtgcgccagcaaagccacaagctgcgcgatggcgtgcgtgccctcacgcgaaagctg
ggccgcgaaccgaccgagcaggaagccattgccggcctgggcgtgacggccgacgaatac
atggcttaccagctcgatgaaagtgccgaaacgctggccagcttcgatgacctgctgcag
gaaggcgccgccgacggcagcgccggcagctcgcccagcccggaagagcagctgatggtg
cggcgcagcctggaacaggcccttagcggattgaacgaacgcgagcagcgtgtggtgcag
atgtactacgagttcgagctcagctacaaggaaatcgccgccgtgctcgacctgacggat
gcgcgcgtgtgccagctgaacaaggctgcactgaccaagatgaaagccgtgctgcagggt
tga
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