Pseudoduganella lutea: EWM63_26970
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Entry
EWM63_26970 CDS
T10124
Name
(GenBank) DNA topoisomerase IB
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
plue Pseudoduganella lutea
Brite
KEGG Orthology (KO) [BR:
plue00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
plue03032
]
EWM63_26970
03400 DNA repair and recombination proteins [BR:
plue03400
]
EWM63_26970
Enzymes [BR:
plue01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
EWM63_26970
DNA replication proteins [BR:
plue03032
]
Prokaryotic type
DNA Topoisomerases
EWM63_26970
DNA repair and recombination proteins [BR:
plue03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
EWM63_26970
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
FliT
Transgly
Motif
Other DBs
NCBI-ProteinID:
QBE66176
UniProt:
A0A4P6L3F8
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All DBs
Position
6398398..6399552
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AA seq
384 aa
AA seq
DB search
MKPEELVTDPPLAARAAGLRYVSDSKPGLSRIAADGGFRYVDAHGGPVDDDATLARIKAL
AIPPAWTDVWICAQANGHLQATGRDVRGRKQYRYHARWRSVRDEVKYERMIAFGQALPSI
RQAVEAALKLPGLPREKVLATVVYLLEHTMMRIGNEEYAKENKSFGLTTLRNRHVRIDGR
EVEFRFRGKSGVFHDVKVADRRLARIIERMRDLPGQELFQYVDDDGTTHSIDSSDVNDWL
RTVTGEDYTAKDFRTWSGTVLAALALQAFEKFDSETQAKKNVVRAIESVAMKLGNTPSVC
RKCYVHPAVLEAYMDGAELAALRARAEEEFSKDLHALQPEEAAVLALLQERLAKAAKDIE
TAQARKKGRRSAPRKGARVLAVAA
NT seq
1155 nt
NT seq
+upstream
nt +downstream
nt
atgaaacccgaagaactggtcaccgatcccccgctggcggcgcgcgcggcggggctgcgc
tatgtcagcgacagcaagccgggcctgtcccgcatcgccgccgatggcggttttcgctat
gtcgacgcgcacggcggcccggtcgacgacgacgccacgctggcccgcatcaaggcattg
gccatcccgcccgcatggaccgatgtgtggatctgcgcgcaggccaacgggcacctgcag
gccaccggccgcgatgtgcgggggcgcaagcagtaccgctaccacgcccgctggcgcagc
gtgcgcgacgaagtgaaatacgagcgcatgatcgcgttcggccaggcgctcccaagcatt
cgccaggcggtcgaggcggcactgaagctgcctggcctgccgcgcgaaaaggtgctggcc
accgtcgtctacctgctcgagcacacgatgatgcgtatcggtaatgaggagtatgccaag
gaaaacaagtcgttcggcctgacgacgctgcgcaaccgtcacgtgcgcatcgatggccgc
gaagtggaattccgcttccggggcaagagcggcgttttccacgacgtgaaggtggccgac
cgccgccttgcccgcatcatcgaacggatgcgcgacctgccgggacaggaactgttccag
tacgtggacgacgatggcacgacccattccatcgactcgtcggacgtcaatgactggttg
cgcaccgtcaccggggaggattacacggcaaaggatttccgcacctggtcgggcaccgtg
ctggccgcgctggccctgcaggcattcgagaaattcgattccgaaacgcaggccaagaaa
aacgtggtccgggccatcgagtcggtggcaatgaagctcggcaatacgccatccgtctgc
cgcaagtgctacgtgcatccggccgtactggaagcctacatggacggcgccgaactggcc
gcgctgcgcgcccgcgccgaggaggagttcagcaaggatctgcatgcgctgcagccggag
gaagcggccgtgctggcgctgctgcaggaacggctggcgaaagcggcgaaggatatcgag
acggctcaggcgcggaaaaagggcaggcgcagtgcgccgagaaagggcgcgcgggtactg
gccgtggctgcctga
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