Candidatus Phytoplasma luffae: LFWB_2330
Help
Entry
LFWB_2330 CDS
T07569
Symbol
rpoA
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
pluf
Candidatus Phytoplasma luffae
Pathway
pluf03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
pluf00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
LFWB_2330 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pluf03021
]
LFWB_2330 (rpoA)
03400 DNA repair and recombination proteins [BR:
pluf03400
]
LFWB_2330 (rpoA)
Enzymes [BR:
pluf01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
LFWB_2330 (rpoA)
Transcription machinery [BR:
pluf03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
LFWB_2330 (rpoA)
DNA repair and recombination proteins [BR:
pluf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
LFWB_2330 (rpoA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
RNA_pol_L_2
HHH_5
RAD51D_N
PHA_synth_III_E
Motif
Other DBs
NCBI-ProteinID:
QTX02803
UniProt:
A0A975FK20
LinkDB
All DBs
Position
235312..236265
Genome browser
AA seq
317 aa
AA seq
DB search
MDKLKFIKPNMNVVEAKTDLANGKFIIFPLEKGLGITIGNSLRRVLLSSLPGVAIVNVKI
EGVNHYFSIIPGVVEDVMSIVLNLKKVVIAVDSNEDDFEVKLKIDTSEEKTITAADFETV
DGVRIINKDQVIATLSDNIPFKMVVTVRKGIGYISAEDNKIYSKNEFGVIAIDSIYTPVL
KVSYNIEPKLNNKEQLVMDIETNKSIQPKEALSLASKILIDHFNILVNLCEKVQDDYFIY
EPKAKSYNHALKLRIDQLGISVRLFNSLKRAGINTVQELVSKNEKYISKLESLGKKSFDE
LKEKIKELELNFQDDEK
NT seq
954 nt
NT seq
+upstream
nt +downstream
nt
atggataaattaaaatttataaaacctaatatgaatgtcgtcgaggcaaaaacagattta
gccaatggaaaatttattatttttcctttagaaaaaggtttaggtattacaatcggtaat
tctttaagaagagttttgttatcttctttaccaggtgtagctattgtgaatgttaaaatt
gaaggtgttaaccattattttagtattattccaggcgttgtagaagatgttatgtctatt
gttttaaatttaaaaaaagtcgttatcgctgtagattctaatgaagacgatttcgaagtt
aaattaaaaattgatacatcggaagaaaaaacaataacagctgctgattttgaaactgta
gatggtgtaagaattattaataaagatcaagtaatagctactttatcagataatatccct
ttcaaaatggtagttactgtcagaaaaggaatcggatatatatcagcagaagataataag
atttatagtaaaaatgaattcggagttatcgcgattgattctatatacactcctgtttta
aaagtttcttacaatatagaacctaaattgaataataaagaacaattagttatggatatc
gaaactaataaatcgatccaacccaaagaagctttatctttagcttctaaaattttgatt
gatcattttaatattttagttaatttatgcgaaaaagtgcaagatgattattttatttac
gaaccaaaagctaaaagttataatcatgctttgaaattaagaatcgatcaattaggtata
tcagttagattatttaatagtttaaaaagagcaggtataaatacagttcaagaattagtt
agcaaaaatgaaaaatatatttctaaattagaaagtttaggaaaaaaatcttttgatgaa
ctaaaagaaaagattaaagaattagaactgaattttcaagatgacgaaaaataa
DBGET
integrated database retrieval system
