Candidatus Phytoplasma luffae: LFWB_3450
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Entry
LFWB_3450 CDS
T07569
Symbol
uvrD
Name
(GenBank) ATP-dependent DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
pluf
Candidatus Phytoplasma luffae
Pathway
pluf03420
Nucleotide excision repair
pluf03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pluf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
LFWB_3450 (uvrD)
03430 Mismatch repair
LFWB_3450 (uvrD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pluf03400
]
LFWB_3450 (uvrD)
Enzymes [BR:
pluf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
LFWB_3450 (uvrD)
DNA repair and recombination proteins [BR:
pluf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
LFWB_3450 (uvrD)
MMR (mismatch excision repair)
Other MMR factors
LFWB_3450 (uvrD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
Viral_helicase1
AAA_30
AAA_11
ResIII
PcrA_UvrD_tudor
DEAD
Motif
Other DBs
NCBI-ProteinID:
QTX02915
UniProt:
A0A975FL59
LinkDB
All DBs
Position
complement(357714..359924)
Genome browser
AA seq
736 aa
AA seq
DB search
MNETKSQNLNQNQLEAVFSKEKAIYLHAGAGTGKTTTLTRRILYLINDLNIKAENILAIT
FTNNAAQEMKERLKKNVDPKNFDNLTISTFHSLGYQILRKNISKLNLDLGNNLYIADESK
SQSVIKDIIKKLNLDKERFKYSRLKKNFAKIKNNEVKKKILNELEQKMQNEEWFTPYDDY
TYDNLSSEEKQIFNLYKEFLKKNNLLDFNDLLIYSYQLLQKDKSITSFYNEKFKYILIDE
FQDIDLIQYNIIKLIGKNNFIFVVGDPNQNIYSFRGANILCNELFIRDFKAHKINLNFNY
RSTQNILDKANLLIQNNHNPKDKSFQNVLKNNSFIGEPVIYKHFINENQEAEFISETIKK
LISKHHYNYHDIIILYRMNQLYKHIENIFITKNIPYIAQNVTSLYQQTVVKDFVSYLKVL
MDPNNDIDLKRIINVPSRKIGIKTINKLEQMANEKNISLFQAMQNLSDDDNIKPKINNFL
NLFYDLQKIFSDENQCNLDNVIKLINEKINYSELLSQKTNNKDSNSQKDKIIDRLNNLQK
IFSIENEEQKTGSFLEKLNILLNKISLSSNENQTEQSNKVLLSSIHKAKGLEFKIVFAIG
WEQNIFFNSDENKKKNVEKEERRIAYVAITRAKELLYITSVKNRFLKGKHIINEPICFLK
EMKLFSDNSFTNKNHKFNQYQTKKNNIYQDGDRVQHNKFGQGIVISATNDLLTISFKLPH
KIKQILITHPSLTKIK
NT seq
2211 nt
NT seq
+upstream
nt +downstream
nt
atgaatgaaactaagtcacaaaatttaaatcaaaatcaattagaagctgttttttctaaa
gaaaaagctatttatttacatgctggtgctggaactggaaaaacaaccaccctcacaaga
agaattctttatttgataaatgatttgaatataaaagctgaaaatattttagcaatcact
tttacaaataatgctgctcaagaaatgaaagaacgtttaaaaaaaaatgttgatccaaaa
aattttgataacttgaccatttcaacttttcattcattaggatatcaaattttaagaaaa
aatatttctaaattaaatttagatttaggaaataatctttatatcgctgacgaaagtaaa
agtcaaagcgttattaaagatataattaaaaaattaaatttagataaagaacgttttaaa
tatagtcgtctgaaaaaaaattttgctaaaataaaaaataatgaagttaaaaagaaaatt
ttaaatgaattagaacaaaaaatgcaaaacgaggaatggtttactccttatgatgattat
acttatgataatttatcttctgaagaaaaacaaatttttaatttatataaagagtttttg
aaaaaaaataatttattagattttaatgatttgttgatttatagttaccaattgttacaa
aaagataaatcaattacttccttttataatgaaaaatttaaatatattctaatagatgag
tttcaagatattgatttgatccaatataatataataaaattaataggaaaaaataatttt
atttttgtagtcggagacccaaatcaaaatatatatagttttagaggagctaatatttta
tgcaatgaattatttattagagattttaaagctcataaaataaatttaaattttaattat
cgttctactcaaaatattttagataaagctaatcttttaattcaaaataaccacaatcct
aaagataaaagtttccaaaatgttttaaaaaacaattcttttataggggaaccagttatt
tataaacattttataaatgaaaatcaagaagctgaatttatttctgaaacaattaaaaaa
ttaatatctaaacatcattacaattatcacgatataattattttatatagaatgaaccaa
ttatataaacatattgaaaatatttttataacaaaaaatattccttacatagctcaaaac
gtaacttctttatatcaacaaacagtagtaaaagattttgtttcttatttaaaagtttta
atggatccgaataatgacattgatttaaaaagaattatcaacgttccatctcgtaaaata
ggaataaaaacaataaataaattagaacaaatggctaatgaaaaaaatatttcattgttt
caagctatgcaaaatttatcagatgatgataatatcaaacctaaaattaataatttttta
aatttattttatgatttacaaaaaattttttctgatgaaaatcaatgtaatttagataat
gttattaagttgataaacgaaaaaattaattactccgaacttttatcacaaaaaacaaat
aataaggattcaaattctcaaaaagataaaattatagatagattgaataatttacaaaaa
attttctctattgaaaatgaagaacaaaaaacaggttcttttttggaaaaattaaatata
ttattaaacaaaatatctttaagttcgaatgaaaatcaaacagaacaaagtaacaaagtt
cttttatcgtcgattcataaagcaaaaggattagaatttaaaattgttttcgcaataggg
tgggaacaaaatatatttttcaattcagatgagaataaaaaaaagaacgtagaaaaagaa
gaaagacgtatcgcctatgtagctattacaagagcgaaagaattattatatatcacaagt
gttaaaaatagatttttaaaaggtaaacatattattaacgaacctatatgttttttaaaa
gaaatgaaattattttctgataattctttcaccaataaaaatcataaatttaatcaatat
caaacaaaaaaaaataatatttatcaagatggcgaccgggttcaacataataaattcgga
caaggaattgtcatatcagcgaccaatgatttattaacaatatcttttaagctaccacat
aaaatcaaacaaattttaataactcacccttctttaactaaaataaaataa
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