Candidatus Phytoplasma luffae: LFWB_5210
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Entry
LFWB_5210 CDS
T07569
Symbol
pnp
Name
(GenBank) polynucleotide phosphorylase/polyadenylase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
pluf
Candidatus Phytoplasma luffae
Pathway
pluf03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pluf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
LFWB_5210 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pluf03019
]
LFWB_5210 (pnp)
03016 Transfer RNA biogenesis [BR:
pluf03016
]
LFWB_5210 (pnp)
Enzymes [BR:
pluf01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
LFWB_5210 (pnp)
Messenger RNA biogenesis [BR:
pluf03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
LFWB_5210 (pnp)
Transfer RNA biogenesis [BR:
pluf03016
]
Prokaryotic type
tRNA degradation factors
LFWB_5210 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
PNPase
KH_1
Motif
Other DBs
NCBI-ProteinID:
QTX03087
UniProt:
A0A975FJK0
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All DBs
Position
544255..546402
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AA seq
715 aa
AA seq
DB search
MISRKFKTIFENNELIIEINKLAKQANGSVLLSYKDSVILTVSVSSKKDTNLNYFPLTVV
YQEKFYSVGKIPGNFNKREGRPSDHEILNSRLIDRSIRSLFEPNFEKEVQIINTILSSDS
DCNNEIFALLGSSLSLLISNIPFNEPVAGVCIGKIKDDLIVNPNKEQKTKSEFLLTLSGT
ENGLNMIEAIANETPEEVLLEAMEYGHKIIKKLCLFQKDIKNEINTPKQNIENKANFQDL
YLDIEEKYKNQIKELLYVSSCLKISKKELQNNISGLRDRLLLEFQDNEKLKVYEEDKKYF
FILENIFDTLLKQEFRKMIIETKTRVDGRNFDNIRNIETKINLLPRVHGSALFTREQTQS
LSVVTLGTLKESKMIDDLTEEEEKRFILHYNFPHFSVGETGRYMSPSRREIGHGILAEKA
LFCVLPSEEEFPYSIRVVSEILESNGSSSMATVCASSMALMAAGVPLKKSVAGIAMGLIF
SNEKEYIILSDIQGLEDRYGDMDFKISGTQKGITALQMDIKIDKVNFDILKKAFSQAYTG
IIKILNKMSLTISQSNKELSIYAPKVKMIKVPINKIRDIIGSGGKIISQIIEKNDNVKID
IKPDGTIFITHSNIEIVQKTVDYIQNLIKNIEVGANYQVVILKILKDKKGQSFGAIAEIS
PGIEGFIHVSELANKRTDNVEDVLNIGDRIFVKCIEINNKGKIFLSLKDYKKITF
NT seq
2148 nt
NT seq
+upstream
nt +downstream
nt
atgatttctcgtaaatttaaaactattttcgaaaataacgaattgattattgaaataaat
aaattagctaaacaagctaatggttctgttttgttatcttataaagatagtgttattctc
actgtatcggtatcaagtaaaaaagatactaatttaaattatttccctttaacagttgtt
tatcaagaaaaattttattcagtgggtaaaattccaggaaatttcaacaaaagagaagga
aggccttctgatcatgaaattttaaattctcgcttaatagacagaagtataagatctttg
tttgaaccgaattttgaaaaagaagttcaaataataaatactattttgagtagtgattca
gattgtaataatgaaatattcgctttattaggaagttcattatctttgttaatttctaat
atcccttttaatgaacctgttgcaggagtttgtattggtaaaataaaagatgatttaatc
gttaatcctaataaagaacaaaaaacaaaatcagagtttttattaactttatcaggtaca
gaaaacggtttaaatatgatcgaagcaatagcaaacgaaacacctgaagaagttttgtta
gaagctatggaatacggccataaaataataaaaaaactttgtttgtttcaaaaagatatt
aaaaacgaaattaacactccaaaacaaaatattgagaataaagcaaattttcaagattta
tatttagatatagaagaaaaatataaaaaccaaataaaagaacttttatatgttagttcg
tgtttgaaaattagtaaaaaagaattacaaaataatatttctggattaagagatagatta
ttattagaatttcaggacaacgaaaaattaaaagtatatgaagaagataaaaaatatttt
tttattttagaaaatatttttgatactttgttaaaacaagaatttagaaaaatgattatc
gaaacaaaaacaagagttgatggtagaaatttcgataatattagaaatatcgaaactaaa
atcaatttattaccaagggttcatggatcagctcttttcaccagagaacaaacacaaagt
ttatcggtagttaccttaggtactttaaaagaaagtaaaatgattgatgatttaacagaa
gaagaagaaaaacgttttattttacattataattttcctcatttttctgttggcgaaaca
ggtagatatatgtccccttctagaagggaaataggtcatggtatattagctgaaaaagct
ttgttttgtgttttaccttcggaagaagaatttccttactctattagagttgtttcggaa
attttagaatcaaacggttcttcttctatggctactgtttgtgcctcttctatggcttta
atggctgccggtgttcctttaaaaaaatctgtagctggtatagctatgggtttgatattt
tctaatgaaaaagaatatattattttaagtgatatccaaggtttagaagatcgttacgga
gatatggattttaaaatatccggaactcaaaaaggaataaccgctttacaaatggatatt
aaaatagataaagttaattttgatattttaaaaaaagctttttcacaagcttatacaggt
ataattaaaattttaaataaaatgtcattaactatttctcaaagtaataaagaattatct
atttacgctcctaaagttaaaatgattaaagttcctattaataaaatacgtgatatcatt
ggttcaggtggaaaaattatttctcaaattatagaaaaaaatgataatgtaaaaatagat
ataaaaccagatggaacaatatttataacacattctaatatagaaattgttcaaaaaaca
gttgattatattcaaaatttaataaaaaatattgaagttggagcaaattatcaagttgtt
attttaaaaattttaaaagataaaaaaggtcaatcttttggagctatagcggaaatttct
ccaggaatagaaggatttattcatgtaagtgaattagccaataaaagaacagataatgta
gaagatgttttgaatataggcgatcgaatatttgttaaatgtatagagatcaataataaa
ggaaaaatttttttatctttaaaagattataaaaaaattactttttaa
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