Photorhabdus luminescens: CE143_03485
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Entry
CE143_03485 CDS
T08000
Name
(GenBank) RNA polymerase-associated protein RapA
KO
K03580
ATP-dependent helicase HepA [EC:5.6.2.-]
Organism
plui
Photorhabdus luminescens
Brite
KEGG Orthology (KO) [BR:
plui00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
plui03021
]
CE143_03485
Transcription machinery [BR:
plui03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
CE143_03485
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RapA_C
Tudor_RapA
Tudor_1_RapA
SNF2-rel_dom
Helicase_C
ResIII
DEAD
AAA_34
Cas3-like_C_2
Flavi_DEAD
Motif
Other DBs
NCBI-ProteinID:
UJD74127
LinkDB
All DBs
Position
complement(812766..815672)
Genome browser
AA seq
968 aa
AA seq
DB search
MPFTLGQRWISDTESELGLGTVVALDARMVTLLFPASGENRLYARNDSPITRVMFNSGDV
VTSHEGWQLKVDEVQQENGLLIYTGTRLDTLEENISLREVLLDSKLTFNKPQDRLFAGQI
DRMDRFALRFRARKYQSEQFKLAESGLRGIRASLIPHQLHIANEVGKRYAPRVLLADEVG
LGKTIEAGMIIHQQLLAGRAERVLVIVPDSLQHQWLVEMLRRFNLRFALFDDSRYTEARH
DSDNPFETEQLILCSLDFVRRNKQRFEHMLEASWDLMVVDEAHHLAWSEDAPSREYQVVE
QLAEQIPSVLLLTATPEQLGQESHFARLRLLDPNRFHDYQAFIDEQQKYRPVADAVTLLL
SGEQLNNNQLNLMGELISEQDIEPLLKAANSNSDESETARRELISMLMDRHGTSRILFRN
TRNGVKGFPRRELHQIKLPLPSQYQTAIKVSDIMGAKKSLEARAWDMLYPEQIYQEFEGE
NATWWNFDPRVEWLLGFLMANRHEKVLVICAKATTALQLEQVLREREGIRGAVFHEGLSL
IERDRAAAYFASEEEGAQVLLCSEIGSEGRNFQFANQLVMFDLPFNPDLLEQRIGRLDRI
GQSRDIQISVPYLENTAQAVLIRWYHEGLDAFEYTCPTGRTIYDHYYETLLNYLAKPNSQ
EKFGEFIDQCRQQHEQLKQQLEQGRDRLLEMNSNGGEHGLQLAEKISEYDNDTDLVNFSL
NLFDIVGINQEDRNDNMIVLTPSDHMLVPDFPGLPKDGCTITFNREQSLSREDAQFISWE
HPIIRNGLDLILSGDTGSCAVSLLKNKALPVGTLLVELIYVVEAQAPKHLQLTRFLPPTP
LRILMDLKGNNLAGQVEFESFNRQLNAVNRHTASKLVNAVQKEVHAILQQAEGLVETQAQ
SLIEQAKQQADENLTAELSRLEALKAVNPNIRDDELEAIESNRQQLLLNLNQAGWRLDAI
RLVVVTHQ
NT seq
2907 nt
NT seq
+upstream
nt +downstream
nt
atgccatttaccctcggtcaacgctggatcagcgatacagaaagcgaacttggattagga
accgttgttgcactggacgcacgaatggtcactttgctctttcctgccagcggcgaaaac
cgtctctatgcacgcaatgattctcctattacccgtgttatgtttaactcgggggatgtt
gtcaccagccatgaaggctggcaactcaaagtggatgaagtccaacaagaaaatggcctg
ctgatttatacaggcacacggcttgatactctggaagagaatatcagtctgcgcgaagtg
ctccttgacagtaaacttaccttcaacaaaccacaggatcgcctgtttgctggtcagatt
gaccgtatggaccgctttgccttgcgttttcgcgcccgtaaatatcaaagcgaacaattt
aaactggctgaaagcggtttgcggggtatccgcgccagcctgatccctcatcaacttcat
atcgctaatgaagtcggcaaacgctacgcgccaagggttctattggccgatgaagtcggt
ttaggtaaaaccatcgaagccgggatgatcatccaccagcaattgctggccggtcgtgct
gaacgcgttctggtgattgtacccgatagccttcaacatcaatggctggtagaaatgcta
cgccgtttcaacctgcgtttcgccctgtttgacgatagccgctataccgaagcacgacat
gacagtgataatccatttgaaacagaacaattgatactctgttcactggattttgtccgc
cgtaataaacagcgttttgagcatatgcttgaagctagctgggatctgatggtggtggat
gaagctcaccatctggcctggagcgaggatgctcctagccgtgaatatcaggttgtcgaa
caattagctgaacagatcccaagtgtactgctattgactgcaacaccagaacagctaggg
caagaaagccattttgcccgtctacgtctacttgatccaaaccgtttccacgattatcag
gcttttatcgacgaacaacaaaaataccgtccagttgccgatgctgtcacactgctgtta
tccggtgaacaacttaataataatcaattaaacctaatgggtgaattgattagcgagcaa
gatattgagcctctgctgaaagccgccaatagtaatagcgatgaaagtgaaaccgcacgt
cgtgaactgatttccatgctgatggatcgtcacggcaccagccgtattctgttccgtaat
acccgtaatggcgtaaaaggcttcccccgtcgcgaactgcaccagatcaagttgcctctg
ccatcccaatatcagaccgctattaaagtctccgatattatgggtgctaaaaaatcactg
gaagcacgcgcatgggatatgctctacccagaacaaatttatcaggagtttgaaggcgaa
aacgctacctggtggaactttgatccccgcgtagagtggctacttggttttctgatggca
aatcgtcatgagaaagtgctggtaatttgtgctaaagcaaccactgctctgcaactggaa
caggtactacgtgagcgcgaagggattcgtggcgctgttttccatgaaggtctatcactg
attgaacgtgatcgcgccgcagcctattttgcttccgaagaagaaggagctcaggtatta
ctgtgttccgaaattggctcagaaggccgcaacttccagttcgctaaccaattagtgatg
tttgatttaccattcaatccagatttactagaacaacgtatcggacgcctggatcgtatc
ggccaaagccgtgatatccagattagtgtgccttatctggaaaataccgcccaagctgtc
ctgattcgttggtatcacgaaggtttggatgcattcgagtatacctgcccaaccggtcgt
actatttatgatcactattatgaaactctgctgaactatcttgccaaacccaatagtcag
gaaaaatttggtgaatttattgatcagtgccgccagcaacatgagcaactcaaacagcaa
ctggagcaaggccgtgaccggctgctggaaatgaactccaacggtggcgaacatggtttg
caactggcagaaaaaatttcagagtatgataatgatactgatttggtgaacttctcactc
aacttatttgatatcgttggtattaatcaggaagatcgcaatgacaacatgatagtgctg
acaccatccgatcatatgctggtcccagatttccctgggttacccaaagatggttgtact
atcacctttaatcgtgaacagtccctgtctcgtgaagatgctcagtttatcagttgggag
cacccaattatccgtaatggattggatctgatcctttccggcgatacgggtagctgtgcg
gtatcccttttgaaaaataaagcattacctgttggaaccctgctggtagaactgatctac
gtagttgaagctcaagccccgaaacacctgcaattgacccgtttccttccaccaacgcca
ttgcggatactgatggacctgaaaggcaataatctggctggtcaggtggagtttgaaagc
tttaaccgccaacttaatgcagtgaatcgtcatactgcaagtaaactggtcaatgcggta
caaaaagaagttcacgctattttgcaacaggccgaaggtttagtagaaactcaggctcaa
tcattgattgaacaagcgaaacagcaagcagatgaaaatctcactgctgaactttcccgt
ttggaagccttgaaggccgtcaatccaaatattcgtgatgatgaattggaagccattgaa
tccaatcgccaacagttgctgcttaacttaaatcaggcaggctggcgtctggatgctatt
cgccttgttgtcgttacgcatcagtaa
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