Photorhabdus luminescens: CE143_03525
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Entry
CE143_03525 CDS
T08000
Name
(GenBank) RNA pyrophosphohydrolase
KO
K08311
putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-]
Organism
plui
Photorhabdus luminescens
Pathway
plui03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
plui00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CE143_03525
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
plui03019
]
CE143_03525
Messenger RNA biogenesis [BR:
plui03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
CE143_03525
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NUDIX
NUDIX_4
Nudt16-like
Motif
Other DBs
NCBI-ProteinID:
UJD74135
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All DBs
Position
824230..824760
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AA seq
176 aa
AA seq
DB search
MIDDDGYRPNVGIVICNRQGQVLWARRYGQHSWQFPQGGINPGESPEQAMYRELYEEVGL
GRKDVRVLASTRNWLRYKLPKRLVRWDTRPVCIGQKQRWFLLQLLCNEEDINVQHSNTPE
FDGWRWVSYWYPVRQVVSFKRDVYRRVMKEFSSVVMPMQESSSLPRSSYSYRRKRS
NT seq
531 nt
NT seq
+upstream
nt +downstream
nt
gtgatcgatgatgatggctaccgcccgaatgtaggaattgtaatttgtaatcggcaaggc
caggttttgtgggcgcggcgttatgggcagcattcctggcaatttcctcaagggggcatt
aatccgggggaatcaccagaacaggctatgtaccgggaactgtatgaagaagtgggttta
ggtcggaaagatgtacgcgttctggcttctactcgtaattggttgcgttacaaattaccc
aagcgtttggtgcgttgggatactcgacctgtctgtatcggtcaaaaacagcggtggttt
ttattacaactgctctgtaatgaagaagatattaatgtgcaacacagtaataccccggag
ttcgatggttggcgttgggtcagctattggtatcctgtccggcaggttgtctcttttaag
cgtgatgtttatcggcgcgtgatgaaagagttttcttcggttgtcatgccaatgcaggaa
agctcatctctgccacgttcttcgtattcttatcgtcgcaaaagaagttag
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