Photorhabdus luminescens: CE143_03585
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Entry
CE143_03585 CDS
T08000
Symbol
recC
Name
(GenBank) exodeoxyribonuclease V subunit gamma
KO
K03583
exodeoxyribonuclease V gamma subunit [EC:
3.1.11.5
]
Organism
plui
Photorhabdus luminescens
Pathway
plui03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
plui00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
CE143_03585 (recC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
plui03400
]
CE143_03585 (recC)
Enzymes [BR:
plui01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
CE143_03585 (recC)
DNA repair and recombination proteins [BR:
plui03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
CE143_03585 (recC)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_V_gamma
RecC_C
VMAP-M0
PSD13_N
Motif
Other DBs
NCBI-ProteinID:
UJD74147
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All DBs
Position
832638..836060
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AA seq
1140 aa
AA seq
DB search
MFKVYHSNQLDLLKELIAILIGDNPLTDPFAQEVILVQSPGMSQWLQIQLAERIGISANI
SFPLPATFIWDMFTKVLPDIPKESAFSKDAMTWKLMALLPQLLPEAEFVALRHYLDQDFD
KRKIHQLAGRVADLFDQYLVYRPQWLESWQQGQLIDGLSDNQLWQKRLWLELTKYTHQLQ
QPQWHRANLYQRFISTLENSPELGNSLELKNSTELSACLPKRVFICGISALPPVYLQALQ
ALARHIDIHLMFTNPCKYYWGDIQNYAFLAKLSSRKPRHYKNEQVLEHFKDPGNAQSLFN
DDGEQEVSNPLLASWGRLGRDNLYLLSQLEQSSDVHAFVELEQDNLLHQLQRDILYLEDH
AQIGSTKETFENSLRKRVLDPLDCSLSFHVCHSPQREVEVLQDQLLRLLEDNPSLTPRDI
IVMVADIDNYTPYVQAVFGNVSAERYIPFAISDRKARQAHSVLQVFITLLDLPQSRFTTE
QVLALLEVPALANKFDIHEDGLRLLRRWVEESGVRWGLDDDNVEELSLPVTGQHTWRFGL
TRMLLGYAMDSRSGPWKEVLPYDESSGLAAELAGQLAELLMQLSYWRKILGESRTLTGWL
PICQELLETFFASDSETELVLAMIEQQWQKVIVNGLNARYQENVPLVLLQDELALQFDNE
KISQRFLAGSVNFCTLMPMRSIPFKVVCLLGMNDGIYPRSIPPLGFDLMAEKGQRGDRKR
RDDDRYLFLEALISAEQFLYISYIGKSIRDDTECNPSVLVNELLDYVCQSFCLPGNEKLN
VDQSAIHVREHLLYLHSRVPFAPENFIPGSYQQSYAGEWLPAATEQGAAYAEFCQSIETA
QIQEITLDSLSSFYRHPVRFFFQRCLKVNFVIEETELPEEEPFVLDNFQRYQFNQLLLSA
LIEQQSPEPLFSRLRAAGGLPFGAFGEVYWLKQQKEMQPLADKIREQQMETLSIDLHHDL
GQMILTGQINKAQPDGLLRWRPASLTANDGMQLWIEHLAYCLAGGEGESRSYGRDGSEWR
FASVSSEQAKDYLNQLIEGYQRGISAPLPLFCKSGWAWLSTCVNKETGEIDDSNEIQSKA
ESQLLKAWLGDQGRTGEGDDPYIQRAFRQIDESFLAKLKQEALNYLLPMARNQKHRENIG
NT seq
3423 nt
NT seq
+upstream
nt +downstream
nt
atgttcaaagtttatcattctaatcaattagatcttcttaaggaattgatagcaatattg
atcggggataatccactgactgatccatttgctcaggaagtcattttggtgcaaagcccg
ggtatgtcacagtggttgcaaatccaactggctgaaagaataggcatatcagccaatatt
tcatttccgcttcccgctacgtttatttgggatatgtttaccaaagtattgcctgatatt
cctaaagaaagtgcttttagtaaagatgctatgacatggaaattgatggcgttattgcct
caattattgccagaagcggagtttgtcgcgctcaggcactaccttgatcaagattttgat
aaacggaagattcatcaattggctgggcgggttgctgatctgtttgaccaatatctagtt
tatcgtccgcaatggttggaaagttggcaacaaggtcagcttattgatggtttgagcgat
aatcagttgtggcagaaaaggttatggctggaactgacgaaatatactcaccagttacaa
caaccccaatggcatcgtgctaatttgtatcagcgtttcatttcgacactggaaaatagc
cctgaactgggaaatagtcttgaactgaaaaatagtactgagctttcagcttgtttacca
aaacgagtatttatctgtggtatttctgccttaccaccggtctatttacaagctttgcag
gcattggcgcggcatattgatattcacctgatgtttaccaatccatgtaaatattattgg
ggggatattcagaattatgcttttctggcaaaactgagcagccgtaaaccacgtcattat
aagaacgaacaggtgctggaacattttaaagaccctggtaatgctcaatcactgtttaac
gatgatggtgaacaagaagtcagtaatcccttgttggcatcgtggggacggttgggtcgt
gataatctctatttattatcgcagcttgagcagagttcggatgttcacgcctttgttgaa
ttagaacaggataatctattacatcaattgcaaagggatattctctatctggaagatcat
gcccaaattggttcaacaaaagagacatttgaaaatagcctgcgaaaaagagtacttgat
ccgttggattgctctttgtctttccatgtttgccatagccctcaacgtgaagtggaagtt
ttacaggaccagttattgcgattattggaagataatccatcgttgacgccaagggatatt
attgtgatggtcgcggatattgacaattatactccctatgttcaggcagtatttggtaat
gtctctgctgaacgttatattccatttgctatttctgatcgtaaggctcgtcaggcacat
tcggttttacaggtatttattacactgcttgatttacctcaaagtcgttttacgacggaa
caggttttagcattgttggaagtacccgcgctggcgaataaatttgacattcatgaagat
ggtttgcgtttattaaggcgttgggttgaagagtcaggcgttcgttgggggctggatgac
gataatgtagaagaactatctttgccggtaacaggtcagcatacatggcgttttggactc
actcgaatgttattgggttatgcaatggatagtcggtctggcccttggaaagaggtattg
ccttatgatgaatccagcggtttagccgcagagcttgccggtcaattagctgaactttta
atgcaattgagctattggcgcaagattctgggcgagagccgaacattaacgggctggtta
cctatctgccaggagttgctggagacattttttgcatcagatagtgaaactgaattagta
ctggcgatgatagagcagcaatggcagaaagttatagtcaacggcttgaatgcccgttat
caagaaaatgtgccattggttctattacaagatgaattggcgcttcagtttgataatgaa
aaaatcagtcagcgttttctcgccggatctgtcaatttttgcactctaatgccgatgcgt
tctattccctttaaggttgtctgtttattgggaatgaatgatggtatctacccccgttca
attccaccgcttggatttgatctcatggcggaaaaaggtcagaggggggacagaaaacgg
cgggatgatgaccgttatctattccttgaagccttaatatctgccgaacagtttctctat
atcagctatattggtaagtccattcgtgatgatacggaatgtaacccttcggtgttggtg
aatgaattactggattatgtttgccaaagtttttgtttaccgggaaatgaaaaactgaat
gttgatcaaagtgctattcatgtcagagaacatctgttgtatcttcattcccgcgttcca
tttgcaccggaaaattttataccgggcagttatcagcaaagctatgccggggagtggtta
ccggcggcaactgagcaaggtgccgcatacgctgaattttgccaatctattgaaacggcg
caaattcaagaaattacacttgatagtttgagcagtttttaccgccatcccgttcggttt
tttttccaacgttgcttgaaagtcaatttcgttatcgaagaaacggaattaccagaggaa
gagcctttcgttttagataactttcaacgttatcagtttaatcagctattgttgagtgca
ctaattgaacagcaatcgcctgagccgcttttcagtcggcttcgtgctgctggcgggttg
ccttttggtgcttttggtgaggtttattggttgaagcaacaaaaagagatgcagcctctg
gcggataaaattcgtgaacaacagatggaaactttatctattgatttacatcatgattta
ggccaaatgattctgacaggacaaattaataaggcgcaaccggatggtttgctgcgttgg
cggccggccagcttaacagccaatgatggcatgcaattgtggattgagcatctggcttac
tgtcttgccgggggggagggtgaaagccgcagttatgggcgtgatggcagcgaatggcgt
tttgcttctgtgtcttcagaacaagcgaaagattatctgaatcaattgattgaaggttat
caacgaggaatatcagcgcctttaccactgttttgtaaaagtggttgggcgtggctttca
acatgtgtgaataaagaaacgggtgagattgatgatagcaatgaaattcaatcaaaagct
gaaagccagctattgaaggcatggcttggagatcagggacgcacaggcgaaggggatgat
ccttatattcagcgggctttcaggcaaatcgatgaatcatttttagcaaaacttaaacag
gaagcgctcaattatttgttaccgatggcgcgaaatcagaaacatagggagaatatcgga
taa
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