Photorhabdus luminescens: CE143_03595
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Entry
CE143_03595 CDS
T08000
Name
(GenBank) exodeoxyribonuclease V subunit beta
KO
K03582
exodeoxyribonuclease V beta subunit [EC:
3.1.11.5
]
Organism
plui
Photorhabdus luminescens
Pathway
plui03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
plui00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
CE143_03595
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
plui03400
]
CE143_03595
Enzymes [BR:
plui01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
CE143_03595
DNA repair and recombination proteins [BR:
plui03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
CE143_03595
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PDDEXK_1
UvrD_C_2
Motif
Other DBs
NCBI-ProteinID:
UJD74149
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All DBs
Position
838945..842553
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AA seq
1202 aa
AA seq
DB search
MITETSVHRLNVLTLPLNGQRLIEASAGTGKTYTIGILYLRLLLGLGKDAAFLRLLSVEE
ILVVTFTEAATNELRGRIRENIHKLRLACIRDEVEDAEPAYQQLLDEIPDKGQAAIWLLA
AERQMDEAAIYTIHGFCQRMLAHNAFESGILFEQTLIQDQQPLERQGCADFWRRHCYPLP
LSMARVISQEWSGPEALLAELHPYLQGDMPYIVNEPDSDETLLSRHEKITQLISDVKYQW
NEVAGELHDLIAGSGVDKRSYSSKHLPNWLNSVTDWAQAPTEDYLLPKALEKFRQSVLAE
KTKKGEVPEHSLFVAIDDLYKQPLTLRDLIISRAIIEIRQSIRQEKLTRGQMGFDDLLTR
LDDALKGPGGDLLAETIRRRYPIALIDEFQDTDPQQYRIFHTIYGTQPENGLLFIGDPKQ
AIYAFRGADIFTYIRARSQVSAHYTLETNWRSAYSMVQAVNKLFMRSEKPFLFEQIPFIE
VSAAEKNRELSFSYDGEEQAALNFWLQPGEGVSTGDYEQTMSRLCAAQIRDWLQAGSEGR
ALLHKSEGSRPVTAADITVLVRSRKEATLIRNALNLLSIPSVFLSNRESVFATAEAKDIL
WLLQAVLSPEKERVLRSALASGLFGLTACQIDKLNHDEKRWDQLVDEFDGYFRLWQRRGV
LPMLRAVIANHHIAENLLASYGGERRLMDVMHIGELLQEISLQLDSEHAVTRWLAQQISH
PDPQSENQQMRLESDRHLVQICTIHKSKGLEYPLVWLPFICNFREQKRAIYHDRTSFNAC
LDIFPDDETIKLAEQERLAEDLRLLYVALTRSVYHCSVGVAPLIKGNKKKIGDTDLHQCA
LGYLLQKGVKGDADFLATSLKELSGDGIVVSSINDTDGHPWQLQSKNDLVLSARQFKRRV
QDEWRITSYSGLRNSVVHRGNASAYFAGEESIDVIVQSIAPKLDVDASGEKQLAEQPEMT
PHTFPRGASAGTFLHAILEEISFSQRPDEKWLAEQLQSAGFDERWSGTLQQWMTDIFTIP
LDDEGMQLAKIPLHHQQDEMQFYLPVEQLLRSQELDMVMRRYDPISARCPQLEFQQVKGM
LKGFIDLVFCWQGKFYVLDYKSNWLGEESQFYTQQAMEIAMIEHRYDLQYQLYTLALHRY
LRHRLANYDYQQHFGGVIYLFLRGIDKQQLGNGIFSCRPSAEFVDALDLLFSGNEQSEKE
KN
NT seq
3609 nt
NT seq
+upstream
nt +downstream
nt
gtgatcacagagacatctgttcacaggcttaatgtattaactctgccgctgaatggtcag
cggctgatcgaagcatcggccggaacgggtaaaacctacactatcggtatcttatatctg
cgtcttctgcttgggctggggaaagatgccgcttttttacgacttttgagcgtggaagaa
attctggtggtcacttttactgaggcagcaacaaatgagttacgtgggcgtatccgtgaa
aatattcataaacttcgccttgcttgtattcgagacgaagtagaagatgcagaacctgcc
tatcaacagctattggatgaaatcccggataaaggacaggcggctatctggttactggcc
gcagagcgacaaatggatgaagccgcgatttataccattcatggtttttgtcagaggatg
ttggcacataatgcttttgaatctgggatcttgtttgaacagacattaattcaggatcaa
caaccattagaacggcaggggtgtgccgatttctggcggcgccattgttatccattgccg
ttatcaatggcacgggtaatcagccaggagtggagtgggccggaagccttgttggctgaa
ttacacccttatttacaaggggatatgccatatatcgttaatgaaccggacagtgatgaa
acactgttaagtcgccatgaaaaaattacccagttgatcagcgatgttaaataccaatgg
aatgaagttgccggagagttgcacgatttaattgcgggttctggtgtcgataaaagaagt
tacagtagtaagcacttaccaaattggctgaatagtgtcacggattgggctcaggcgcct
acagaggattatctgttgccaaaagcgttggagaaattccggcagtcggtattggcagaa
aagacaaaaaaaggtgaggtacctgaacattcactttttgttgcaatagatgatttatat
aagcaaccacttactttacgtgatttgattatctccagagctattattgagattcgccaa
tcaatccgtcaggaaaaattaacacgtggtcagatggggtttgatgatttacttacccgt
cttgatgatgcgctgaaaggtcccggcggcgatttgcttgctgagactattcgtcggcgc
tatccgattgcgttgatcgacgaatttcaggataccgacccacagcaatataggattttt
cataccatttatggcactcaacctgaaaatggattgctgtttattggtgatcccaaacaa
gctatttatgcatttcgtggcgcagatattttcacttatattcgcgcccgctctcaggta
agtgctcactatactctggaaacaaattggcgctctgcttactcaatggtacaggcagta
aacaaactgtttatgcgttcggaaaagccatttttgtttgagcagatcccttttattgaa
gtctctgcggcagaaaaaaatcgagagctctcttttagctatgacggtgaagaacaggcc
gcactgaatttctggttacaaccgggagaaggcgtttctaccggagattatgagcaaacg
atgtcacggctctgtgctgcgcaaattcgagattggttgcaggcaggtagtgaagggcgg
gctttgttacataaaagtgaaggttctcgacctgtgacggcggctgatattacggttttg
gtgcgtagcagaaaggaagctacattgatccgtaatgcgcttaacttgttatctattcct
tccgtatttctttctaaccgagaaagtgtatttgctaccgcggaagccaaggatattctc
tggttactgcaagcggtgttatccccggaaaaagaacgggttttgagaagtgcgttggcg
agtggtttatttggtctgactgcctgtcagatagacaagttgaatcatgatgaaaagaga
tgggatcagttagttgatgaatttgatggctactttcgtctgtggcaacgccgtggtgtg
ttgcctatgttacgggcggtaatcgccaaccatcatattgctgagaatttgcttgccagt
tatggcggtgaacggcgtttgatggatgtgatgcatattggtgagttgttgcaggagata
tctttacaacttgatagtgaacatgcagtcacccgctggttggctcaacaaatttctcat
cctgatccacaatctgaaaaccagcagatgcggttggaaagtgatcgtcatttggtacaa
atttgcactatccataaatctaaaggtctggaatatccgctggtatggctgccatttatc
tgtaatttcagggagcagaagcgggcgatatatcatgatcgtacaagctttaatgcttgc
cttgatatctttcctgacgacgagacgattaagctggcggaacaagagcgattggcagag
gatttgcgtttactctatgtcgcattgacgcgctctgtttaccattgtagtgtcggcgtg
gctccgctgataaaaggcaataagaaaaagatcggggatacggatctgcatcagtgtgct
ctaggctacctgttgcaaaagggggtgaaaggggatgctgattttctggcaacatcgctt
aaagaattaagtggagatggcatcgttgtatcatcaattaatgatactgatggtcatccc
tggcaattgcaaagtaaaaatgatttagtcctatcggccaggcaatttaaacgcagagtt
caggatgagtggcgtattaccagttattctggtttacgaaactctgtggtgcatcgtggc
aatgcttctgcttattttgcgggagaagaatcgattgacgtgattgtccagtctattgcg
ccaaagcttgatgttgatgctagtggtgaaaagcagttagcagaacaacctgaaatgacg
ccacatacatttcctcggggagcctcggcagggacttttttacacgctattttagaagaa
attagtttcagccaacgacctgatgaaaaatggttggcagaacaactgcaatcagccgga
tttgatgaacgctggagtgggacattacagcaatggatgaccgatatttttaccattcca
ttggatgatgaaggaatgcagcttgcaaaaattccgctgcatcatcaacaggatgaaatg
cagttttatctgccggttgaacaacttttgcgatctcaggaattggatatggtaatgcgt
cgttatgacccgatttctgctcgttgcccccaactggaatttcagcaggtgaaaggaatg
ctgaaagggtttattgatttggtcttctgttggcaaggcaaattctacgtgctggattac
aaatcaaactggttgggagaggagagccagttttatactcaacaggcaatggaaatagcc
atgattgagcatcgctatgacctgcaatatcagctttatacactggcgctgcatcgttac
ttgcgtcacaggttggctaattatgactaccaacaacatttcggcggcgtgatttatctg
tttctcagggggatagataaacaacagctggggaatggtatttttagttgtcggccatcg
gctgaatttgtcgatgctttggatctgcttttcagtggtaatgaacagtctgaaaaagag
aaaaattga
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