Photorhabdus luminescens: CE143_03855
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Entry
CE143_03855 CDS
T08000
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
plui
Photorhabdus luminescens
Pathway
plui03030
DNA replication
plui03430
Mismatch repair
plui03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
plui00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CE143_03855
03430 Mismatch repair
CE143_03855
03440 Homologous recombination
CE143_03855
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
plui03032
]
CE143_03855
03400 DNA repair and recombination proteins [BR:
plui03400
]
CE143_03855
Enzymes [BR:
plui01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CE143_03855
DNA replication proteins [BR:
plui03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
CE143_03855
DNA repair and recombination proteins [BR:
plui03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
CE143_03855
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
DNA_pol_IIIA_C
HHH_6
tRNA_anti-codon
MJ0607
Motif
Other DBs
NCBI-ProteinID:
UJD74190
LinkDB
All DBs
Position
895895..899377
Genome browser
AA seq
1160 aa
AA seq
DB search
MAEPRFVHLRVHSDYSMIDGLAKTSPLVKKVAQLGMPAFAITDFTNLCGLVRFYGSAHGA
GVKPIIGADFYVESELLGDEYASLTILARNNTGYHNLTLLISEAYQKGYGAIGPTIKLEW
LINHKEGLILLSGGRMGDVGKFLLRGNQVMVDQCLEFYQEHFPGCYYLELIRTGRADEES
YLHAAVALATEKNLPVVATNDVCFIDSEDFDAHEIRVAIHDGYTLADPKRPKNYSPQQYL
RSEQEMCELFADIPEALENSVEIAKRCNVTIRLGEYFLPQFPTGEMSTEDYLIDRSKQGL
EERLAFLYPDPKVRAEKRPEYDERLDVELRVINQMGFPGYFLIVMEFIQWSKDNGVPVGP
GRGSGAGSLVAYALKITDLDPLEFDLLFERFLNPERVSMPDFDVDFCMEKRDLVIDHVAD
IYGRDAVSQIITFGTMAAKAVIRDVGRVLGHPYGFVDRISKLIPLDPGMTLEKAFAAEPQ
LPEIYEADEEVKALIDMARKLEGVTRNAGKHAGGVVIAPTKITDFSPLYCDPEGLNPVTQ
FDKNDVEYAGLVKFDFLGLRTLTIINWALEMINARRAKKGLEPIDIAAIPLSDAKSFDML
QRAETTAVFQLESRGMKDLIKRLRPDCFEDMIALVALFRPGPLQSGMVDNFIDRKHGREE
ISYPDIQWQHESLQPVLEPTYGIILYQEQVMQIAQVLAGYTLGGADMLRRAMGKKKPEEM
AKQRSVFEDGAKKLGIDGQLAMKIFDLVEKFAGYGFNKSHSAAYALVSYQTLWLKAHYPA
EFMAAVMTADMDNTEKVVGLIDECWRMGLKILPPDINSGLYHFHVNDDGEIVYGIGAIKG
VGEGPIEAIIEARQKGGYFRELFDLCARVDIKKLSRRVMEKLIMSGAFDRLGPHRAALMS
TLEDALKAADQHAKAEATGQTDMFGVLAEEPEEVERSYANIPQWPEQIVLDGERETLGLY
LTGHPITRYLKEIERYTNGLRLKDVNPTPRGQVTTVIGLVLASKVIITKRGNRIGICTLD
DRSGRLEVMLFSDALEKYRHLLEQDRILIATGQVSFDDFNGGLKMTARELMDISEAREKY
ARGLAISLSDRQIDDQLLNRLRSALEPHRSGTIPVHLYYQREDARARLRFGATWRVTPTD
NLLTDLRTLLGNEQVELEFD
NT seq
3483 nt
NT seq
+upstream
nt +downstream
nt
atggccgaaccccgttttgtgcacttacgtgttcacagcgactattcaatgattgatggc
ttagccaaaaccagccctttagtgaaaaaggttgcgcagttaggtatgccggcttttgcg
atcactgattttactaatttgtgtgggttggtgagattttacggcagtgctcatggagca
ggagtaaaaccgattattggtgctgatttctatgtagaaagtgaactgcttggtgatgag
tacgctagcctcaccattcttgcgcgcaataataccggttatcataatctgacgttgctg
atatcagaggcttatcagaagggatatggtgcgattggtccgacaattaaactagaatgg
ctgataaaccataaagaaggtctaatcttactctctggtggccgtatgggggatgtgggt
aaattcctgctacgtggtaatcaggtcatggtggaccaatgccttgagttttatcaggag
cattttcccggctgttattatttggagttgatccgcactgggcgtgcagatgaagaaagt
tatcttcatgccgcagttgcactggcaacggaaaaaaacctgccagtcgttgcaactaat
gatgtttgtttcattgatagcgaagattttgatgcacatgagattcgcgtagcgattcat
gatggctatactttggccgaccccaaacgcccgaaaaattacagtcctcagcaatatctg
cgtagtgaacaggaaatgtgtgaactattcgctgatattcctgaagcgctggagaacagt
gtagaaattgctaagcgctgtaatgtcactattcgccttggtgaatatttcctgccgcaa
ttccctacgggagaaatgagtactgaagattatctgatagatagatctaaacaagggttg
gaagaacgcttggcatttctctatccggatcctaaagtacgtgcagaaaaacgtcctgaa
tatgatgagagactcgatgttgaacttcgggttatcaaccagatgggatttcctggctac
ttcctgatcgtgatggaattcattcagtggtcgaaagacaacggtgttcctgtaggtcct
ggacgtggttcgggggctggttctttggtggcttatgccctgaaaataaccgatctcgat
cctttggaatttgacctgctatttgaacgattcctaaaccctgaacgtgtttcgatgcct
gattttgacgtcgatttctgtatggaaaaacgcgatctggtgattgatcatgtggctgat
atatatggccgtgacgccgtatctcagatcatcacattcggaacaatggcagcgaaagcg
gtaatccgggatgttggccgagtgctagggcatccatacggatttgttgatcggatttcc
aaattgataccgcttgatccaggtatgacgctggagaaagcatttgccgcggagccacaa
cttcctgaaatctatgaagcggatgaggaagttaaggcgctgatagatatggcgcgtaaa
ttggaaggcgtcactcgtaatgccgggaaacacgcgggtggggtggttattgctccaact
aaaatcaccgatttttcgcctctctattgtgacccagaaggtttgaacccggttactcag
tttgataaaaacgatgtggaatatgcagggttggtgaaatttgacttcctcggattgagg
acactgaccattatcaactgggcattagagatgatcaacgcgcgtagagcgaagaaaggt
ctggagccgattgatattgcagcaattccgctgagtgacgctaaaagctttgatatgttg
caacgcgctgaaacaacagcggtatttcagcttgaatcccgtggtatgaaggatctgatt
aaacgtctgcgtcccgattgcttcgaagatatgatcgcgcttgttgctttattccgtcca
ggtcctttgcaatcaggcatggtggataacttcattgaccgcaaacacggccgggaagag
atctcatacccggatatacagtggcagcacgaatctttacagccagtattagagccaact
tacggcattatcctttatcaagaacaagtgatgcagattgctcaagtattggcaggatat
actctcggtggtgcagatatgctccgacgagcgatgggcaagaaaaaaccggaggagatg
gctaagcagcgttctgtctttgaagacggagcaaaaaaactgggtattgatggccaactg
gcaatgaaaatctttgacctagtagaaaagtttgccggttacggatttaacaaatctcac
tctgctgcgtatgccttggtttcttatcaaaccttatggttgaaagcacattacccggct
gaattcatggctgcggtaatgactgctgatatggataatacagaaaaagttgttggtttg
attgatgaatgctggcgcatggggttgaaaatcttaccacctgatatcaatagtggcttg
tatcatttccacgttaatgatgacggggagatcgtatatggtatcggtgcaattaaaggg
gtaggtgaagggccgattgaagcgatcatcgaagctcgtcagaaaggtggttattttaga
gaactgtttgatttatgtgcccgtgttgacatcaagaagttaagtcgccgagtgatggaa
aaactgatcatgtcaggggcatttgaccgtttggggccgcaccgtgcagcactgatgtct
acgctggaagatgccctaaaagcggcggatcaacatgctaaagcggaagctactggtcag
actgacatgtttggtgtattagctgaagagccagaagaagtggaacgctcttatgccaat
attcctcaatggccggaacagattgttcttgacggtgaacgggaaacgttgggtctctat
ttaaccgggcatcctattactcgttatttaaaagaaattgagcgctatactaatggattg
aggttaaaagatgtgaatccaacaccgcgcggtcaggtaacgactgtgatagggttagtg
ttagcatccaaagtgattataaccaaacggggtaaccggattggtatttgtaccttagat
gaccgttcaggacgtctagaagttatgttattttccgatgccttggagaaatatcggcat
ttgttagaacaagaccggatattaattgctacagggcaggtcagctttgatgacttcaat
ggcggtcttaaaatgacagctcgtgaattaatggatattagtgaagcgcgtgaaaaatat
gcgcgtgggcttgctatctcgctgtcagacaggcaaattgatgatcaattgttgaaccgt
cttcgtagtgcattggaaccacatcgttcgggaacgataccagttcatctttattaccag
agggaagacgcccgcgcccgtttaagatttggtgcgacgtggagggtaacgccaacggat
aaccttctgacagatttgcgaactctgctgggtaatgagcaggtagaattagaatttgac
taa
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