KEGG   Photorhabdus luminescens: CE143_04105
Entry
CE143_04105       CDS       T08000                                 
Name
(GenBank) RNA polymerase subunit sigma
  KO
K23514  RNA polymerase sigma-19 factor, ECF subfamily
Organism
plui  Photorhabdus luminescens
Pathway
plui02020  Two-component system
Brite
KEGG Orthology (KO) [BR:plui00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    CE143_04105
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:plui03021]
    CE143_04105
Transcription machinery [BR:plui03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     CE143_04105
SSDB
Motif
Pfam: Sigma70_r4_2 Sigma70_r2 Sigma70_r4 HTH_7 HTH_23 GerE HTH_24 HTH_28 TnsD Sigma70_ECF MarR HTH_Tnp_4 HTH_VMAP-M9 HTH_40 HTH_11 HTH_Mga DUF722 DUF2774
Other DBs
NCBI-ProteinID: UJD74232
LinkDB
Position
complement(953472..953981)
AA seq 169 aa
MKMTVNVSDTQQIQCMYIHNHDWLFRWLKHRLNCDETAADLTQDTFVKLLRSPLPQQLNE
PRAYIVTIAKGLMVNWYRRRSLEQSYLDLLVSLPEPLIPAPEQKLIILETLQEIDIMLNQ
LPTPVQTVFLLSQIEGMKYEDIANQMNISLSTVKRYMKQGFYQCLIAMA
NT seq 510 nt   +upstreamnt  +downstreamnt
atgaaaatgaccgttaatgtttcagacactcaacagatccagtgcatgtacatccacaat
catgattggctatttcgttggcttaagcatcgtcttaactgtgatgaaaccgccgcagac
ctgacccaagatacttttgttaaattacttcgttcacctttaccacagcaacttaatgaa
ccccgtgcctacatcgtcaccattgccaaagggttgatggttaactggtaccgccgccgc
tcacttgaacaatcttatctggatttactcgtcagtctgcctgaaccgctcattcccgca
ccagagcaaaaacttatcatcctcgaaacgcttcaggaaattgatatcatgctgaatcaa
ctccccacgccagtgcaaactgtctttttactttcccagatagaaggaatgaagtatgaa
gatattgcaaatcagatgaatatttcgctgtccacagtaaaacgttatatgaaacaaggc
ttttatcaatgcctgatagcaatggcataa

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