Photorhabdus luminescens: CE143_04655
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Entry
CE143_04655 CDS
T08000
Name
(GenBank) polynucleotide adenylyltransferase PcnB
KO
K00970
poly(A) polymerase [EC:
2.7.7.19
]
Organism
plui
Photorhabdus luminescens
Pathway
plui03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
plui00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CE143_04655
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
plui03019
]
CE143_04655
Enzymes [BR:
plui01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
CE143_04655
Messenger RNA biogenesis [BR:
plui03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
CE143_04655
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PolyA_pol_arg_C
PolyA_pol
PolyA_pol_RNAbd
Motif
Other DBs
NCBI-ProteinID:
UJD78002
LinkDB
All DBs
Position
complement(1077056..1078621)
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AA seq
521 aa
AA seq
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MISYLSRCTIFNRVANFCRNLLIREGKTNREPQAASEGSVTGSNRSTQEEYVTLHSNRQN
PYQSSSNVEMQRKVEQENPHPDSLITIIPREQHSISRRDISENALKVLYRLNKSGFEAYL
VGGGVRDLLLGTKPKDFDIATNATPEQVRKLFRNCRLVGRRFRLAHIMFGQEVIEVATFR
GPHEQTGSGDKNQSQQAQSGMLLRDNIFGSIEEDAMRRDFTINSLYYGINDFSLRDYAGG
LHDLETGVIRLIGDPETRYREDPVRMLRAIRFASKLNMTISEDTAEPISRLAFLLSNIPP
ARLFEESLKLLQTGQGYSTYQLLREYRLFQPLFPLVQRYFTENNDSPMERMVNQVLKNTD
FRLQNDKRVNPAFLFAAMLWYPLVEHAEKLSQEGGLAYYDAFALAMNDILDEQCHSIAIP
KRLTTIMRDIWQLQLRLPRRHGKRANKLMEHPKFRAAYDLLELRANVENRNELKELAHWW
GEFQQVNASQQRHMISELGSEIVRRRTRPRRHYKPRLSRNG
NT seq
1566 nt
NT seq
+upstream
nt +downstream
nt
atgattagttacttatcgaggtgtaccatttttaaccgagtagcaaatttctgccgtaac
ttattgatccgcgaagggaaaactaaccgcgaaccacaggcagccagtgaaggatcagtc
accggatctaatcgttctactcaggaagagtacgtaactcttcactctaatcgccaaaac
ccttatcaatcttcatccaatgtggaaatgcaaaggaaggttgaacaggagaatcctcat
cctgactcattaataacgataattccacgggaacaacatagtatttcccgcagagatatc
agtgaaaatgcactgaaagttctttaccgtctgaataaatccggctttgaagcctatctg
gttggcggtggcgtccgtgatttattgctcggcacgaaaccgaaagattttgatattgcc
accaatgcaacgccagaacaggtacgtaagctatttcgcaactgccgtctggttggacgc
cgcttccgtttagctcatattatgtttggtcaggaagtgattgaagtcgcaacattccgt
ggtccacatgaacaaacgggttccggtgataaaaatcagtcacaacaagcacaaagcggt
atgctactgcgggataacatcttcggatcaattgaagaagatgctatgcgccgcgatttc
accataaacagcctctattacggcatcaatgatttctctctgcgtgattatgccggtggt
cttcatgatctggaaaccggtgttatccgcttgattggcgatcctgaaactcgctatcga
gaagatccagtaagaatgctgcgtgcgatccgcttcgccagcaaactaaatatgaccatc
agcgaagataccgccgaaccgatttctcgtttggcttttctgctgagtaatattccacca
gcccgcctgtttgaagaatcgctaaaacttttacaaaccggtcaaggctacagcacttat
caacttctgcgcgagtaccgcctatttcaaccactttttccattggttcaacgctatttc
accgaaaataacgactcgccaatggaacgtatggtcaatcaggttttgaagaataccgac
ttccggttacagaacgataaacgggttaatccggcgtttttgttcgccgcgatgctctgg
tatccactggttgagcatgcggaaaagctgtcccaagaaggtggtctggcttactacgac
gctttcgcattggctatgaatgatattttggatgagcaatgccactccattgctattcct
aagcgcctgacaaccatcatgcgtgatatctggcaattacagttacgtctgccacgccgt
catggtaaacgggcaaataagttgatggagcaccctaaattccgtgctgcctacgatttg
ctggaactcagggccaatgtcgaaaaccgcaatgagctaaaagaacttgcccattggtgg
ggagaatttcagcaagtcaatgcatcacagcaacgacatatgatttccgaactgggcagt
gagattgtccgtcgtcgtacacggccacgccgtcactataaaccaagactaagcaggaac
ggctga
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