Photorhabdus luminescens: CE143_05465
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Entry
CE143_05465 CDS
T08000
Name
(GenBank) Fis family transcriptional regulator
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
plui
Photorhabdus luminescens
Pathway
plui03420
Nucleotide excision repair
plui03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
plui00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
CE143_05465
03430 Mismatch repair
CE143_05465
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
plui03400
]
CE143_05465
Enzymes [BR:
plui01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CE143_05465
DNA repair and recombination proteins [BR:
plui03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
CE143_05465
MMR (mismatch excision repair)
Other MMR factors
CE143_05465
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
AAA_19
Viral_helicase1
AAA_11
UvrD_C
AAA_22
AAA_30
AAA_16
HTH_16
Motif
Other DBs
NCBI-ProteinID:
UJD74478
LinkDB
All DBs
Position
1289033..1290907
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AA seq
624 aa
AA seq
DB search
MTEVIDTKTVDDEIYGCLDLDNPKSFFLFAGAGSGKTRSLVEVLKRFREHNIHRLRVKAQ
QVAIITYTNAACDEIKRRLEFDSAFSVSTIHSFAWELIKPHQHDIRESLRVRLQSDIVEL
EEAQRKGRAGTKAAEDRPKQIAAKLKRLESLSNIRKFTYNPNGENLGKDSLNHAEVIGIT
AELLISRPLLQQILTRKFPVLLVDESQDTKKELIDALFVVQSLHQDKFSLGLFGDIMQRI
YNDGKEDLGLAPLPDGWLTPKKEYNHRCPRRVVKLINKIRAEVDQNLQQSAKLEEGFVRL
FIADTSDGIDKEAYERFVCQKMAEITADDLWIAEKKHNKTLTLEHHMAAQRGGFASFFNS
LYEVDKLRTGLLDGTHAGITFFSERVLPLIKSLDVGNHFAVSRIVNKYSPLISKECIEQS
AEPKAELAKAKDAVDGLYVLWRDDADPSLINILKEVQRTRLFNVPDVLTLIAERQDRNYE
KAEDDNDRDPVVDAWDTALMSRFSEFKEYVAYISDESRFGTHQGIKGLEFPRVIVILDDE
EARGFLFSYDKLFGAKPPTATDIRNQKEGKETSIDRTRRLFYVTCSRAEKSLAIVAYTNE
PNKVKTNIMSQNWFEEHEIISCQI
NT seq
1875 nt
NT seq
+upstream
nt +downstream
nt
atgacagaggtgattgatactaagacagttgacgatgagatctatggatgtctagatcta
gataatccaaaaagcttctttttgtttgccggggctggttcgggcaaaactcgctcttta
gtcgaagtacttaagcgatttcgtgaacataatatccatcgtttgcgagtaaaagcacaa
caagtagcaatcattacttataccaacgccgcttgtgatgaaattaaacgccgcttggag
ttcgattctgcctttagcgtctcgaccattcatagttttgcttgggaactaatcaagccg
catcagcatgatattagagagtcgcttagagtcagacttcaatcagacattgtcgaactt
gaggaagcacagcgtaaaggtagagcaggcacaaaagcggccgaagatagaccaaagcag
attgcggccaaactaaagcggctggagtcactaagcaacattaggaagtttacttacaat
cctaatggtgaaaatttgggcaaggattcacttaaccatgccgaagtgatcggcataacc
gctgaattgctgatcagccgtccattgttgcagcaaattcttacacgcaaattcccggtt
ttgcttgtagatgaaagtcaggacacgaaaaaagagctaattgatgctttgtttgtagtt
cagagcttacatcaggacaagttctcgttaggtctgttcggcgacatcatgcagcggatt
tataacgatggaaaagaagacctaggtctagctccattgccggatggttggcttactcca
aaaaaggaatataaccatagatgtcctcgtcgagttgtgaaactcatcaataaaattcga
gccgaggtcgatcaaaacttacagcaatccgctaagctagaggaaggcttcgttagacta
tttattgcggatacatctgatgggatagacaaagaggcttatgagcgctttgtttgtcaa
aaaatggcagagattacagctgatgacttgtggatagcagagaaaaaacacaataaaaca
ctaaccttagaacatcacatggcggcacaacgagggggctttgcaagctttttcaattct
ctctatgaagtagataagcttagaaccggtttgcttgatggaacccatgctggcattact
tttttttcagagagagtacttccacttatcaagagcttggacgtaggtaaccacttcgct
gtttctagaatcgttaataagtattcgccacttatttctaaagaatgtattgaacaaagt
gctgagcctaaggcggagttagcaaaagctaaggatgctgtcgatggtctttatgttcta
tggcgtgatgacgcagatccctctctaatcaacatccttaaagaagttcagcgcactcgt
ttgttcaatgtccccgatgttctcacattgattgctgagaggcaggataggaactatgaa
aaagcagaagatgataatgatcgagatcccgttgttgacgcttgggataccgcgttgatg
tctcgctttagtgagtttaaggaatacgttgcgtacatatctgatgaatctaggttcggt
actcatcaaggcattaaagggctcgaatttccaagggtaatagtcattctagatgacgaa
gaagctcgtggctttttgttcagttatgataaattgtttggagctaaacccccaaccgca
acagacatacgtaaccagaaggaaggcaaagaaactagtattgatcgcactagacgactg
ttttatgtgacttgtagtcgagcggaaaaaagtttagcgatagttgcttacacaaacgag
cctaataaagtaaaaacgaatattatgagtcaaaattggtttgaggaacatgaaattata
tcctgtcaaatataa
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