Photorhabdus luminescens: CE143_08865
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Entry
CE143_08865 CDS
T08000
Name
(GenBank) L,D-transpeptidase
KO
K21470
L,D-transpeptidase YcbB
Organism
plui
Photorhabdus luminescens
Brite
KEGG Orthology (KO) [BR:
plui00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
plui01002
]
CE143_08865
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
plui01011
]
CE143_08865
Peptidases and inhibitors [BR:
plui01002
]
Cysteine peptidases
Family C82
CE143_08865
Peptidoglycan biosynthesis and degradation proteins [BR:
plui01011
]
Peptidoglycan biosynthesis and degradation
Transpeptidase
CE143_08865
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
YkuD
Scaffold
PG_binding_1
PgdA_N
PG_binding_3
Motif
Other DBs
NCBI-ProteinID:
UJD75046
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Position
2043927..2045675
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AA seq
582 aa
AA seq
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MVKRAIKPLCISVICSTSIVAGYALANHQSRIIEGDMQNLPKMQVEKISETTIPEQVQIQ
TAAISETERRKIVRSWLPAQVKPVFFDQLVSLYSSNQMQPLWQDKIAVQRFEQQLSELAL
AGFQPQFGQWLTELNDAQLSQMGRDLILSDAMLGYLQFVSDVGQQGQSWLYRTMLYNSTT
PYKSITAYKIVLPSSEVVDQWQQAIIDHNVAAYVAALAPQHPQYENMRKEMMKQLADSKP
WPQLSDKSALKPGQSSSDVAVLREILIRLGMLSELTAQADHIYDPELVTAVKNFQRWQGL
APDGVIGKRTRDWLNTSPQTRAGLIALNIQRLRIIPSRVSTGIMVNIPDYSLHYYLNDQE
VLDSKVIVGRPSRKTPIMSSVLNNVVINPPWSVPTSLARKDIAPRGLDDPGYFQRGGYVI
FSNWRADASVIDPYTIDWSVITPANFPYRIWQAPGPTNSLGRYKFNMPNSEAIYLHDTPN
HNLFNKDIRAISSGCVRINKASELANMLLGDVGWTQNKVANTVKQGNTVYVNIPQRIPVY
LYYLTAWVDEQGIPQYRTDIYDYDNSVRQGSQFLSKLLPLQN
NT seq
1749 nt
NT seq
+upstream
nt +downstream
nt
atggtaaaaagagcgataaagccactgtgtatttcggttatttgtagcacatcgatagta
gctggatatgctttagctaatcatcagagtaggattattgaaggtgatatgcaaaatctg
ccaaaaatgcaggttgaaaagatatctgagacaaccatacccgaacaggtacaaattcaa
actgctgcaatttcagaaacagagcgtcgtaaaatagtgcgaagctggttaccagcgcaa
gttaagcctgttttctttgaccaattggttagtttgtactcttccaatcagatgcaacct
ttgtggcaagataaaatcgcggttcaacgctttgaacaacaactttcagaactcgcattg
gctggctttcagccgcaatttggtcaatggctgactgaactcaatgatgctcaattgagt
cagatgggacgtgatctcatcttatcggatgctatgctaggttatttacaatttgtttca
gatgtcggtcagcagggccaaagctggctctatcgcactatgttatataacagcactaca
ccgtacaaaagcattacagcatacaaaattgtattaccttcatcagaagttgtggatcag
tggcagcaagctattatcgatcacaatgtggccgcttatgttgcagcattggcgccacaa
catcctcaatatgaaaatatgcgcaaggagatgatgaaacaactggctgatagtaaaccg
tggccacagctttctgataaaagtgcgctaaaaccgggacagagtagttctgatgtcgct
gtgttgagagaaatacttattcgccttgggatgttgagtgaactgacagctcaagcagat
catatctacgatcctgaattggtgactgcggtaaaaaatttccagcgttggcaagggttg
gcgccggatggcgtaattggtaaacgcacaagagattggctaaatacttcacctcaaact
agagcgggtttgatagcgcttaatatccagcgtttgcgtattatcccaagccgtgtgtct
acaggaattatggtcaatattccagattattcattgcattattatcttaatgatcaggaa
gtgttggactcgaaagtgatcgttggtcgtccaagccgtaaaacacccattatgagtagt
gtgctgaataatgtggtgattaatcctccctggagtgtgccgactagcctggcaagaaaa
gatatcgcgccacgagggcttgatgatcccggatattttcaacggggaggatacgttatc
ttttcaaattggcgtgctgatgccagtgtcatcgacccttacacgattgattggagtgtg
attacgcctgctaactttccttatcgaatatggcaagctccggggccgactaactcatta
ggccgctataaatttaatatgccaaactcggaggctatctatttgcatgatacgccgaac
cataacctgtttaacaaagacattcgggcgatcagctctggttgtgtacggattaacaag
gcttccgaattagcgaatatgttattgggagatgtggggtggactcaaaacaaggtggct
aataccgtgaaacagggcaataccgtttatgttaacattccacagcgtattcctgtttat
ttgtattatttaactgcttgggtagatgaacaggggattcctcagtaccgtaccgatatt
tatgattacgataatagtgtgagacaaggttcccagtttttgtcaaagttgttaccttta
caaaactaa
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