Photorhabdus luminescens: CE143_10995
Help
Entry
CE143_10995 CDS
T08000
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
plui
Photorhabdus luminescens
Brite
KEGG Orthology (KO) [BR:
plui00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
plui03016
]
CE143_10995
Enzymes [BR:
plui01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
CE143_10995
Transfer RNA biogenesis [BR:
plui03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
CE143_10995
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
RNAseD_HRDC_C
HRDC
Motif
Other DBs
NCBI-ProteinID:
UJD75422
LinkDB
All DBs
Position
2500037..2501164
Genome browser
AA seq
375 aa
AA seq
DB search
MNYQLITTDAQLQQVCERAKKYSKVALDTEFVRTRTYYPQLGLIQLYDGEQLSLIDPLNI
TNWQPFRELITHPQILKLLHAGSEDLEVFLNAFQCLPEPMIDTQVLAAFIGRPLSCGFAA
LVAEYIHVELDKSESRTDWLARPLSEKQCEYAAADVYYLLPLADILMTATAQAGYMEAAT
GECQLISRRRKEILEPESAYKQIGNLCQLRPQQLACLKKLAAWRLNQARERDLAVNFVIR
EENLWQVARYMPTSLAELDALGLSGQEIRCHGRRLLAMVAESGNIPESECPPPVTNLIDQ
PGYRKAFKDIKALIHQVSEQHRFNSELLASRRQINQLLSVHWKLKQLNGKPELLSGWRGE
LLAEPVAEILANYPD
NT seq
1128 nt
NT seq
+upstream
nt +downstream
nt
ttgaattatcagttgatcaccacagatgctcagttgcagcaagtttgcgaaagggcaaaa
aaatactcaaaagtagcattggatactgaatttgtacgcacacggacgtattatccacaa
ttaggtttgatacaactgtatgatggcgaacaactttctctgattgatccacttaatatc
accaactggcaacctttccgtgagttaattactcatcctcaaatattgaagctgttgcat
gccggcagtgaagatttggaagtttttctgaatgctttccaatgtttgcctgaaccgatg
attgatactcaggtcctggcggcttttattgggcgcccgctttcatgtggctttgccgcg
ctggtggctgaatatattcatgtcgagctggataaaagcgaatcccgaactgattggctt
gctcgcccgttaagtgaaaaacagtgcgaatatgcggcagcggatgtttattatctgttg
cctttggcggatatcctgatgactgcgacagcgcaggccggatatatggaggctgcgacg
ggtgaatgtcagcttatcagtcgacgccgtaaagagatattagaaccagaatctgcttat
aagcagataggcaacctctgtcaattacgcccccagcagcttgcgtgtttgaaaaaactg
gctgcatggcgtttgaatcaggccagagaacgcgatttagccgtgaacttcgtcattcgt
gaagaaaacctgtggcaggtagcgcgttatatgccaacttctttggcagagttggatgcg
ttagggctaagtgggcaggagattcgttgtcatggccgtcgtctattggcaatggtcgct
gaaagtggaaatatccctgaaagcgaatgcccgccgccagtgacgaacctgattgatcaa
cctggttatcgtaaagcgtttaaggatattaaagcgctgatccatcaggtaagtgagcag
catagatttaattctgaattattggcatctcgtcgtcagattaatcaattactcagtgtt
cattggaaattgaaacaattaaatggcaagcctgagctgcttagtggatggcggggagag
ttgctggctgaacctgttgcagagattctggcgaactatcctgattaa
DBGET
integrated database retrieval system
