Photorhabdus luminescens: CE143_16945
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Entry
CE143_16945 CDS
T08000
Symbol
treR
Name
(GenBank) trehalose operon repressor
KO
K03485
LacI family transcriptional regulator, trehalose operon repressor
Organism
plui
Photorhabdus luminescens
Brite
KEGG Orthology (KO) [BR:
plui00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
plui03000
]
CE143_16945 (treR)
Transcription factors [BR:
plui03000
]
Prokaryotic type
Helix-turn-helix
LacI family
CE143_16945 (treR)
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Gene cluster
GFIT
Motif
Pfam:
LacI
Peripla_BP_3
Peripla_BP_1
HTH_3
HTH_38
Peripla_BP_4
HTH_7
HTH_31
HTH_Tnp_ISL3
HTH_IclR
MarR_2
CENP-B_N
SpoIIID
HTH_23
MarR
AAA_18
HTH_5
Motif
Other DBs
NCBI-ProteinID:
UJD76490
LinkDB
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Position
complement(4003663..4004610)
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AA seq
315 aa
AA seq
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MSNKLTIKDIARLANVGKSTVSRVLNNENSVSPQVRERVEAIIQQNNFVPSKSARAMRVK
SDKIIALIVSRLGSFSENLSISTMLPLFYQRGYDPIIMESNFDLQLLQEHLRQLALRHAD
GIILFGFTGLSEELLCPWRDKIVVFAREYTGFSSVCYDDIGAVRLLMNEFYRRGHRNISF
LGVDDCDTTTGFLRHQSYLNYCQQKGLRSLSVQCDLSYQSGFQYVNKVLREKTTALICAT
DSLALGAYKYLQQNNREDIQIGSIGNTPLLNFLYPNTLSIDLGYSEAGKYAAGQLIAQIN
RQYPKKQVIIPSKLA
NT seq
948 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaataaattaacaataaaagatatcgctcgtttggctaatgtcggcaaatcaaca
gtttcgcgggtattaaacaatgaaaatagtgtaagtccacaagtacgtgaaagagttgag
gcgattatccaacaaaataattttgttccatctaaatcagcaagagcgatgagagtgaaa
agtgacaaaatcattgctttaattgtgtcgcgtctgggatctttttcagagaatttatcg
ataagtaccatgttacctctgttttaccagcgtggttacgatccgattattatggaaagt
aattttgatctacagcttttacaggaacatctacgtcaattggcattgcgtcatgcggat
ggcattattttattcggtttcactggattgtcagaagagctcctctgcccttggcgtgac
aaaatagtggtatttgcccgcgaatatacgggtttttcttctgtatgttatgacgatatc
ggtgctgtgcgtttattgatgaatgaattctatcggcgggggcacagaaatatcagtttt
ctcggcgtagatgattgtgataccacgacaggttttcttcgccatcaatcttatctgaat
tattgtcaacagaaggggttgcgttcgctttccgtccaatgtgatttaagctatcagagt
gggtttcagtatgttaataaggtattgagagagaagacaacagctttaatctgtgcaacc
gatagtttggctttaggtgcatataaatatttgcagcaaaataatcgggaagatatacaa
ataggtagcattggtaatacacctttgttgaactttttataccctaacacgctttctatt
gatctgggttatagtgaggcaggtaaatatgcggctggtcaattaattgctcagataaac
cggcaataccctaaaaaacaagtaatcattccgagtaagttggcttaa
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