Photorhabdus luminescens: CE143_19560
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Entry
CE143_19560 CDS
T08000
Name
(GenBank) nuclease SbcCD subunit C
KO
K03546
DNA repair protein SbcC/Rad50
Organism
plui
Photorhabdus luminescens
Brite
KEGG Orthology (KO) [BR:
plui00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
plui03400
]
CE143_19560
DNA repair and recombination proteins [BR:
plui03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
CE143_19560
Archaeal homologous recombinant proteins
CE143_19560
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SbcC_Walker_B
AAA_23
AAA_29
AAA_21
ABC_tran
SMC_N
cobW
AAA_14
NTPase_1
AAA_22
AAA_16
AAA
Motif
Other DBs
NCBI-ProteinID:
UJD76949
LinkDB
All DBs
Position
4523574..4527260
Genome browser
AA seq
1228 aa
AA seq
DB search
MKILSLRLKNINSLQGEWKIDFTAEPFASSGLFAITGPTGAGKTTLLDAICLALYHETPR
LTISTSQNELMTRHTAESLAEVEFEVKGVAYRAFWSQRRARNQPNGNLQSPKAELALSHS
GKILADKPQDTKEKIIEITGLDYDRFTKSMLLSQGDFAAFLNAKPNERADLLEELTGTEI
YGILSQQIYQQHKQAQSELDILQAKASAIDLLTAEQYQQYLEQQQQLTHAESQLNQQIKT
VQHSAQWLTREEELERLVTENNASLQQAEKALTHAEPQLQKLASSEPAETLRPLLDDQNR
TQYEHQRISKQLKEMHQQLHQQQQTLTPIQQNVTHADSARAAHQQHRQQQEKLITEQVIP
LDHQIAVQIKELNLTQQQINEQKTVLENRCQQYDTANQRALSFTNQRKQLENYFEQQPYH
QHFGEKLAFWQHQFSWRQEQQQQIDHQTQRIGELTAEIAQLNDNLNKQGEDLKQQIENNQ
PLELAFEQAKQQFFTLQKQYSPEKLKKQLTQYQEQLPLQHKLEILSPQILQLQAAIASHH
IRLQQPEKLLKELPVQIETIDKQLSDKQQHLADLTQRIQLEQKIVSLEKERTQLKEGSPC
PLCGSEHHPAIQAYQNIELPKSEQRLKDLRLQFDELQATQISLVNKKEFQQQQYDHILQE
IADAEPRLNILTQQWQETCATLQIDISLSDKPALELFVQQNQSAHQLCQTQLTELELAEK
TYQKTEKTVAAHQEHVKEIERNIELSKHQYNALKKHLSELQPEIQQQQRKLTDAIEKMTS
ELQQYDLSLPMLNESENWLQQRRKEWQAYQNCHENWQQIQKEEAVIQNQIESLHKQKEEY
VSRLNELNQTAQQQKQQLAETQQQRKKLFGEQSVTEITQALQQQSQKLEEMHKQALSHLQ
QAQSSINQLTGAIHETEKNCRQSEQQKQQAEQNLNVALAKSSFTDQHALEAALLSQEQRK
ELRQLKEQLEQQQIQANALCQKAIEALQQHRKNRPELLDQYTKSQLTEQLESLIDELKRN
TLQQGELKNLLGNDATRRQQQKSLLEEISHCQQNYDDWSYLNNLIGSADGAKFRRFAQGL
TLDHLVHLANQRLKKLHGRYDLQRKNSDGLELQVVDTWQADAIRDTKTLSGGESFLVSLA
LALALSDLVSNKTSIDSLFLDEGFGTLDQETLDIALDALDHLNASGKTIGVISHIEAMKE
RIPVQIKVKKINGLGISKLSPEFRYGKQ
NT seq
3687 nt
NT seq
+upstream
nt +downstream
nt
atgaaaattttgagtctacggctaaagaacattaattcattacaaggtgaatggaaaatt
gatttcacagcagagccgtttgccagcagtggtctgttcgccataaccggcccgaccggt
gcgggtaaaactaccttattagatgcgatctgccttgcgctttatcacgaaaccccacgc
ttgacgatttctacctcacaaaatgagctgatgacccgacacaccgcagaatcactagcc
gaagttgagtttgaagtgaaaggtgtcgcttaccgtgctttctggagccaacggcgagca
cgtaatcaaccaaatggcaatctgcaatcccctaaagcggagctcgcactcagtcacagc
ggtaaaattctggcagataagccccaagatacgaaagagaaaatcattgaaataactgga
ttagattacgaccgtttcaccaaatccatgttgttatcccaaggggacttcgccgctttc
ctcaatgccaaaccaaacgaacgggctgatttattggaagagttaaccggcactgaaatt
tacggcattctatcccaacaaatttaccaacaacataaacaagcacaatcagagctggat
attctgcaagccaaagcatccgccattgatttgttaacagcagaacaatatcaacaatat
ctagaacaacagcaacaactcactcatgctgaatcacaactcaatcagcagataaaaaca
gtgcaacattcggcacaatggctgacacgtgaagaagaacttgagcgacttgttactgaa
aataacgcttccttacaacaggcagaaaaggcgcttactcatgcagagccgcaactgcaa
aaactggctagcagtgaaccggcagaaacattgcgcccattgctggatgatcaaaaccga
acgcaatatgaacatcagagaatcagcaaacagttgaaagagatgcatcagcaacttcat
caacaacaacagacgctcacgccgatacagcaaaacgtgactcatgcagattctgccaga
gccgcacaccaacaacaccggcaacaacaagaaaagctgataacagaacaggtgattcca
ttagatcatcaaattgcggtgcagattaaagaactcaatcttactcagcaacaaatcaac
gaacagaaaaccgtacttgaaaaccgctgtcagcaatatgacaccgcaaatcagcgcgcc
ctatcattcaccaatcaaagaaaacaactggaaaactatttcgaacaacaaccttatcat
caacatttcggtgaaaagctggctttttggcaacatcaattctcttggcggcaagaacag
cagcaacaaattgatcaccaaacgcaaagaattggcgaactcaccgccgaaatcgcgcaa
cttaacgataatctgaacaaacaaggagaagatttaaaacaacagattgaaaataaccaa
ccgctggaactggcatttgaacaagctaagcaacaattttttactctgcaaaaacaatat
tcgccggagaaattaaaaaaacaattaactcaatatcaggaacagctaccgctgcaacat
aaactagaaatcctatcgccgcaaatcttgcaattacaagccgctattgccagtcaccat
attcgcttacaacaaccggaaaagttattaaaggaacttcctgttcaaattgaaaccatt
gataaacaactctcagacaaacagcagcatttagccgatctgactcaacgtattcagtta
gaacaaaagattgtcagtctggaaaaagaacggacacaactcaaggaaggctctccttgc
ccactgtgcggttctgaacatcatcctgccattcaagcttatcaaaatattgaactgcca
aaatcagaacaacggttaaaagatttacgtctgcaattcgacgagttacaagccacccaa
atatcattggtcaataaaaaagagttccaacagcaacaatacgaccatattttgcaagaa
attgctgatgctgaaccacgattgaatatattaactcaacaatggcaggaaacttgcgca
acattacagatcgacatttctctttcagataaacccgctctcgaactatttgtgcaacaa
aaccaatctgctcatcagctttgccaaacccaattaaccgaacttgaactagcagaaaaa
acgtaccagaaaacagaaaaaacagtggccgctcatcaagaacacgttaaagaaattgag
cgaaatattgaactgagtaagcatcaatacaatgcactgaaaaaacacttatctgaactg
caaccagagatacaacagcagcagcgtaagctgacggatgccatcgaaaaaatgacatca
gaattacagcaatatgatttatcactgccaatgttgaatgaaagtgaaaactggctgcaa
caacgtagaaaagagtggcaggcatatcaaaactgtcatgaaaactggcaacagatccaa
aaagaagaagcggttatccaaaatcagattgaatcattgcataaacagaaagaagaatat
gtatcccgtttaaacgagcttaatcaaacagcacaacagcagaaacaacaactcgcagag
acacaacaacaacgcaaaaagctatttggtgaacaatctgttacagaaatcactcaagca
ttacaacaacaatctcaaaagctggaggaaatgcacaaacaagcattgtcacatctgcaa
caagcgcaatccagcatcaaccaactaaccggcgccattcatgagacagaaaaaaactgt
cgccaatctgaacaacaaaaacagcaggcagaacagaaccttaatgtcgcgttagctaaa
agctcatttaccgatcaacatgcccttgaagcggcactgttatcgcaagaacaacgtaag
gaattacgacaactcaaagaacagcttgaacaacagcagatacaagccaacgccctatgc
cagaaagcgatagaggccctgcaacaacatcggaaaaatcgccctgaattacttgatcaa
tatacaaaatcacaactgaccgaacagttggaaagccttattgatgagctaaaaagaaac
accttacaacaaggagagctgaaaaacctgcttggtaatgatgcaacacgccgtcaacag
caaaaatccttattggaagagatcagtcattgccaacaaaattatgatgactggagttat
cttaataacctgattggttcggctgatggcgctaaattccgtcgttttgctcaaggatta
acactggatcatttggttcatctcgccaatcaacggctgaaaaaattgcatggacgctac
gatttgcaacgtaaaaacagtgatggtcttgaactacaagtggttgatacctggcaagcc
gatgctattcgtgataccaaaacgctttctggcggcgaaagttttctggttagcctcgcc
ttggctttagcgctatctgatttagtcagcaataaaaccagtattgattcactattcctg
gatgaaggctttggcacacttgatcaagaaacccttgatattgcgcttgacgcgctggat
catttaaatgcttccggtaaaaccatcggtgttatcagccacattgaagccatgaaagaa
cggatacccgtgcagatcaaagttaaaaaaattaatgggcttgggataagtaaactctcc
cctgagtttcgttatggtaaacaatag
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integrated database retrieval system
