Photorhabdus luminescens: CE143_22810
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Entry
CE143_22810 CDS
T08000
Name
(GenBank) DEAD/DEAH family ATP-dependent RNA helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
plui
Photorhabdus luminescens
Pathway
plui03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
plui00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CE143_22810
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
plui03019
]
CE143_22810
03009 Ribosome biogenesis [BR:
plui03009
]
CE143_22810
Enzymes [BR:
plui01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
CE143_22810
Messenger RNA biogenesis [BR:
plui03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
CE143_22810
Ribosome biogenesis [BR:
plui03009
]
Prokaryotic type
rRNA helicases
CE143_22810
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
CMS1
Cas3-like_C_2
DRTGG
UvrD-helicase
AAA_22
Motif
Other DBs
NCBI-ProteinID:
UJD77534
LinkDB
All DBs
Position
complement(5298151..5300052)
Genome browser
AA seq
633 aa
AA seq
DB search
MTTETEISFADLGLSAPILSALEDLGYEKPSPIQQQCIPHLLNGRDVLGMAQTGSGKTAA
FSLPLLHNINAELKAPQILVLAPTRELAVQVAEACADFSKHMRNVNVVALYGGQRYDVQL
RALRQGPQIVVGTPGRLLDHLKRGTLDLSNLSGLVLDEADEMLRMGFIEDVENIMSQIPA
EHQTALFSATMPEAIRRITRRFMNDPQEVRIQASVTTRPDISQSYWSVYGMRKNEALVRF
LEAEDFDAAIIFVRTKNATLEVAEALERNGYNSAALNGDMNQALREQTLERLKDGRLDIL
IATDVAARGLDVERISLVVNYDIPMDAESYVHRIGRTGRAGRAGRALLFVENRERRLLRN
VERTMKLTIPEVELPNAELLSQRRLEKFAANVQQQLESSDLDQYRTLLSKLQPAEDLDIE
TLAAALLKMAQGERPLILPPDPARRPRREFNERDDRRRNGFDDRGERGDRPRRERRDVGE
MELYRIEVGRDDGVEVRHIVGAIANEGDISSRYIGNIKLFATHSTIELPKGMPGDLLSHF
TRTRILNKPMNMQLLGDAQPFERRERRGGGRNGNGSGPRRDRESFNGGGRRFNGERRGGE
GRGEGQSRSNFRGRGDDHGSSAPRRRHNNSNAQ
NT seq
1902 nt
NT seq
+upstream
nt +downstream
nt
atgaccactgagactgaaatctcttttgctgatctgggtttatcagcacctatcctttct
gcactggaagatcttggctatgaaaagccatctccaattcagcaacaatgtattccccat
ttattaaatggtcgtgacgtactaggtatggcgcagacggggagtggtaaaactgcggca
ttcagtctgcctttactgcataacatcaatgctgagttgaaagctccacagatccttgtg
ttggcgccgacccgtgaactggcggtacaggtagccgaagcgtgcgcagatttttccaaa
catatgcgtaacgtgaatgttgttgcgctgtatggtgggcaacgttatgacgttcagtta
cgcgctttgcgtcaagggccacaaattgttgtgggtacacctgggcgtcttttggatcat
ctgaaacgtggtacgttagatctatctaacctgagcggcttagttttggatgaagcagac
gaaatgctgcgtatgggctttatcgaagatgttgaaaacatcatgagccagatccccgca
gagcatcagactgcgctgttctctgcaactatgccagaagctatccgtcgcattactcgt
cgttttatgaacgatccgcaggaagtgcgtattcaagcgagtgtaacgactcgtcctgac
atcagccagagctattggtctgtttacggtatgcgtaaaaatgaagctttggtgcgtttc
cttgaagcagaggattttgatgccgcgattatttttgtgcgcaccaaaaacgcaacgctg
gaagtggcagaagcactggagcgtaatggctacaacagtgcggcgctaaacggtgatatg
aaccaggcactgcgtgagcagacattggaacgtctgaaagatggccgtttggatattttg
attgcaactgatgttgcagcgcgtggtctggatgttgagcgcatcagtctggttgttaac
tatgacattccaatggatgccgaatcttatgttcaccgtattggccgtactggtcgtgca
gggcgtgctggtcgagcgttgttgtttgtagaaaaccgtgaacgtcgcttgttacgtaac
gttgaacgtacaatgaagctgactatcccggaagttgaactgccaaatgctgaattgttg
agccagcgtcgtctggaaaaatttgccgctaatgtacagcagcaattggaaagcagtgat
ctggatcagtaccgtactctgttgtctaaattgcaacctgcggaagatctggatatagaa
acgctggccgcggcattattaaaaatggcgcaaggtgagcgtccattgattctgcctcca
gatccggcgcgtcgtcctcgccgtgaattcaatgaacgtgatgatcgtcgtcgtaatggt
tttgatgatcgtggcgaacgcggcgatcgtcctcgtcgtgaacgccgtgatgtcggtgaa
atggagttgtaccgtattgaagtgggccgtgatgatggtgttgaagttcgtcatatcgtt
ggtgcgattgctaacgaaggtgatatcagcagccgttatattggcaatatcaaattgttt
gcaacgcattccacaattgaattgccaaaaggtatgccaggtgatttattgtcccacttt
acccgtacccgcattctgaacaagccaatgaatatgcagttattgggtgatgcacagcca
tttgaacgtcgtgaacgtcgcggtggtgggcgtaacggtaatggtagtggccctcgccgt
gatcgtgagagttttaatggtggcggtcgtcgtttcaatggtgaacgccgcggtggagaa
ggtcgtggtgaaggccaaagccgtagcaatttccgtggtcgtggtgatgatcatggttca
tctgctccacgccgtcgtcataacaatagtaacgcacagtaa
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