Entry |
|
Symbol |
phrB
|
Name |
(GenBank) deoxyribodipyrimidine photo-lyase
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KO |
|
Organism |
|
Brite |
KEGG Orthology (KO) [BR:plul00001]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:plul03400]
FOB45_08925 (phrB)
Enzymes [BR:plul01000]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
FOB45_08925 (phrB)
DNA repair and recombination proteins [BR:plul03400]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
FOB45_08925 (phrB)
Prokaryotic type
FOB45_08925 (phrB)
|
SSDB |
|
Motif |
|
Other DBs |
|
LinkDB |
|
Position |
1:complement(420969..422405)
|
AA seq |
478 aa
MTQLVWFRTDLRVRDNTALAAACAAGPVLALYLITPEQWQEHDDSPAKVDFWRRNLKVLA
ETLHTLNIPLLIRQVARWADAAAIVAKLSQQHGIQTVHVNAEYGVNEQRRDDAVKAALDC
NRIGFQRHLDQLFFEPGSVLTKSGGYFKVFGQFRKTCINLLQHSLPPLSPPPHVQAVRSI
ESDPVPNQINSYTMVSSTIQQQWPAGENEAHARLRRFVDERMEVYHHDRDFPSHPGTSEL
SAYLAAGVLSPRQCLHAVLSANRGELTTGAPGASTWVDELLWREFYKHILVGYPHVSMSR
AFHPHTEALPWRRNTDDLDAWKYGKTGIPIIDAAMRQMRETGWMHNRLRMITAMFLSKNL
LIDWREGERWFMQNLIDGDLAANNGGWQWSASTGTDSVPYFRIFNTYSQSERFDPKGRFI
RTWVPELASLDDKAIHKPFKRWQHAIKDYPAPIVEVKESRERALMAFRNLPKAAKRQA |
NT seq |
1437 nt +upstreamnt +downstreamnt
atgacccaactcgtctggttccgtaccgatcttcgtgtacgggacaatacggcattggct
gccgcttgcgcagcaggaccagtgctggccctttatctgattacacccgaacaatggcag
gaacacgacgactctcctgccaaggtcgacttctggcgccggaacctgaaagtcttggcc
gagacgctgcatacgctcaatattcccctgttgattcgtcaagtggctcgctgggctgat
gcggccgctattgtcgccaagctaagccaacaacatggtattcagaccgttcatgtcaat
gctgaatatggtgtcaacgaacaacgtcgtgatgatgcagtaaaggcagcgttggactgc
aatcgaataggctttcagcgtcatctggatcagctgtttttcgagcctggctcagtgctt
acgaagagtgggggctacttcaaggtcttcggccaattccgtaaaacctgcatcaacctc
ctacagcatagccttccaccgcttagcccgccgccccatgtccaggctgtgcgctccatc
gaatcggatcccgtacctaaccagataaactcctatacgatggtttcaagcacgatacag
cagcaatggcctgcgggcgaaaatgaagcgcatgccagactgcgtcgctttgtcgatgag
cgcatggaggtgtatcaccacgaccgggactttccttctcaccctggtaccagtgaatta
tccgcttatcttgcagcaggcgtgctctcccctcgccaatgtctgcacgcggtgttgagc
gccaaccggggcgagctgacaaccggagcgccaggcgcatcgacctgggtcgacgagtta
ctatggcgagagttctacaagcacattctggtaggttatccccatgtttcgatgagcaga
gcgtttcacccgcataccgaagcgctaccctggcggcgaaatacagacgatcttgacgca
tggaaatacggcaaaaccggcattccgatcattgatgcagccatgcgccagatgcgtgaa
acaggctggatgcacaaccggctgcgcatgatcactgccatgtttctgagcaagaatctg
ttgattgactggcgcgaaggtgaacgctggttcatgcaaaacctgatcgatggcgatctg
gctgccaataatggtggatggcagtggagcgcctcgactggcactgactccgtgccctat
ttccgaatattcaatacctattcgcaatcggagcggtttgatcccaagggacgcttcatt
cgtacctgggttccagagctggcctcgctcgatgacaaggctattcataagccgttcaag
cggtggcaacatgctatcaaggactacccagcgcctatcgtcgaagtcaaggagagccgt
gaacgcgccttgatggcgttcagaaatctgcccaaggctgccaaacgccaggcatga |