Pseudomonas luteola: FOB45_08925
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Entry
FOB45_08925 CDS
T06601
Symbol
phrB
Name
(GenBank) deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
plul
Pseudomonas luteola
Brite
KEGG Orthology (KO) [BR:
plul00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
plul03400
]
FOB45_08925 (phrB)
Enzymes [BR:
plul01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
FOB45_08925 (phrB)
DNA repair and recombination proteins [BR:
plul03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
FOB45_08925 (phrB)
Prokaryotic type
FOB45_08925 (phrB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
QEU27911
LinkDB
All DBs
Position
1:complement(420969..422405)
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AA seq
478 aa
AA seq
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MTQLVWFRTDLRVRDNTALAAACAAGPVLALYLITPEQWQEHDDSPAKVDFWRRNLKVLA
ETLHTLNIPLLIRQVARWADAAAIVAKLSQQHGIQTVHVNAEYGVNEQRRDDAVKAALDC
NRIGFQRHLDQLFFEPGSVLTKSGGYFKVFGQFRKTCINLLQHSLPPLSPPPHVQAVRSI
ESDPVPNQINSYTMVSSTIQQQWPAGENEAHARLRRFVDERMEVYHHDRDFPSHPGTSEL
SAYLAAGVLSPRQCLHAVLSANRGELTTGAPGASTWVDELLWREFYKHILVGYPHVSMSR
AFHPHTEALPWRRNTDDLDAWKYGKTGIPIIDAAMRQMRETGWMHNRLRMITAMFLSKNL
LIDWREGERWFMQNLIDGDLAANNGGWQWSASTGTDSVPYFRIFNTYSQSERFDPKGRFI
RTWVPELASLDDKAIHKPFKRWQHAIKDYPAPIVEVKESRERALMAFRNLPKAAKRQA
NT seq
1437 nt
NT seq
+upstream
nt +downstream
nt
atgacccaactcgtctggttccgtaccgatcttcgtgtacgggacaatacggcattggct
gccgcttgcgcagcaggaccagtgctggccctttatctgattacacccgaacaatggcag
gaacacgacgactctcctgccaaggtcgacttctggcgccggaacctgaaagtcttggcc
gagacgctgcatacgctcaatattcccctgttgattcgtcaagtggctcgctgggctgat
gcggccgctattgtcgccaagctaagccaacaacatggtattcagaccgttcatgtcaat
gctgaatatggtgtcaacgaacaacgtcgtgatgatgcagtaaaggcagcgttggactgc
aatcgaataggctttcagcgtcatctggatcagctgtttttcgagcctggctcagtgctt
acgaagagtgggggctacttcaaggtcttcggccaattccgtaaaacctgcatcaacctc
ctacagcatagccttccaccgcttagcccgccgccccatgtccaggctgtgcgctccatc
gaatcggatcccgtacctaaccagataaactcctatacgatggtttcaagcacgatacag
cagcaatggcctgcgggcgaaaatgaagcgcatgccagactgcgtcgctttgtcgatgag
cgcatggaggtgtatcaccacgaccgggactttccttctcaccctggtaccagtgaatta
tccgcttatcttgcagcaggcgtgctctcccctcgccaatgtctgcacgcggtgttgagc
gccaaccggggcgagctgacaaccggagcgccaggcgcatcgacctgggtcgacgagtta
ctatggcgagagttctacaagcacattctggtaggttatccccatgtttcgatgagcaga
gcgtttcacccgcataccgaagcgctaccctggcggcgaaatacagacgatcttgacgca
tggaaatacggcaaaaccggcattccgatcattgatgcagccatgcgccagatgcgtgaa
acaggctggatgcacaaccggctgcgcatgatcactgccatgtttctgagcaagaatctg
ttgattgactggcgcgaaggtgaacgctggttcatgcaaaacctgatcgatggcgatctg
gctgccaataatggtggatggcagtggagcgcctcgactggcactgactccgtgccctat
ttccgaatattcaatacctattcgcaatcggagcggtttgatcccaagggacgcttcatt
cgtacctgggttccagagctggcctcgctcgatgacaaggctattcataagccgttcaag
cggtggcaacatgctatcaaggactacccagcgcctatcgtcgaagtcaaggagagccgt
gaacgcgccttgatggcgttcagaaatctgcccaaggctgccaaacgccaggcatga
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