Pseudomonas luteola: FOB45_12965
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Entry
FOB45_12965 CDS
T06601
Name
(GenBank) sigma-70 family RNA polymerase sigma factor
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
plul
Pseudomonas luteola
Pathway
plul02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
plul00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
FOB45_12965
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
plul03021
]
FOB45_12965
Transcription machinery [BR:
plul03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
FOB45_12965
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
Sigma70_r4
PhyR_sigma-like
Sigma70_ECF
HTH_23
GerE
HTH_VMAP-M9
Motif
Other DBs
NCBI-ProteinID:
QEU28644
LinkDB
All DBs
Position
1:1245828..1246340
Genome browser
AA seq
170 aa
AA seq
DB search
MCAAEVSSPNALHDWYSEHHGWLHGWLSKRLGCSFNAADLAQDTFLRLLAKGRDLPSVRE
PRAYLSTIAHSLLVNHWRRQDIERTYLEALADRSEYYAPSPEAREIIIESLVQIDAMLDR
LPEKVRSAFLMSQLEGQTYAAIGEVLGVSERMVKKYMAQAMLHCLTLKVE
NT seq
513 nt
NT seq
+upstream
nt +downstream
nt
atgtgcgcggctgaagtgtcatcacccaacgccttgcatgactggtatagcgagcatcat
ggttggctgcacggctggctgagcaaacggttgggatgctcgttcaatgcagccgatctg
gcccaggatacattccttcgcctgttagccaaaggacgcgatcttccgtccgttcgagag
ccgcgcgcttacttatcgaccatcgcccattcattactcgtcaatcactggcggcgtcag
gatatcgaacggacctatctcgaggcgctggctgatcgttccgagtattacgcgccatct
ccagaagcgcgagaaatcattattgaaagtctcgttcaaatcgacgccatgctggaccgt
ctacctgaaaaggtgcgctcagccttcctgatgtctcaactggaagggcagacgtatgca
gccattggtgaggtgctaggggtgtccgagcgaatggtaaaaaagtacatggcccaagcc
atgctgcactgcctgacccttaaggtggaatag
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