Pseudomonas luteola: FOB45_13675
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Entry
FOB45_13675 CDS
T06601
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
plul
Pseudomonas luteola
Pathway
plul03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
plul00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
FOB45_13675 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
plul03019
]
FOB45_13675 (recQ)
03400 DNA repair and recombination proteins [BR:
plul03400
]
FOB45_13675 (recQ)
Enzymes [BR:
plul01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
FOB45_13675 (recQ)
Messenger RNA biogenesis [BR:
plul03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
FOB45_13675 (recQ)
DNA repair and recombination proteins [BR:
plul03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
FOB45_13675 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
HRDC
RecQ_Zn_bind
Helicase_C
HTH_40
HTH_23
ResIII
Sigma70_r4_2
GerE
HTH_29
HTH_7
PAX
Motif
Other DBs
NCBI-ProteinID:
QEU28773
LinkDB
All DBs
Position
1:1391078..1393213
Genome browser
AA seq
711 aa
AA seq
DB search
MFDQALRILKDVFGYDAFRGNQARIIERVANGGDALVLMPTGGGKSLCYQVPALLREGLT
VVVSPLIALMDDQVATLDELGVPAVALNSTLSPEAQRDIAARLERGEIKLLYLAPERLVQ
PRMLNFLQRLGNIALFAIDEAHCVSQWGHDFRPEYLQLGQLAEQFPDVPRIALTATADMR
TRDEMIQRLHLQNAEQFLSSFDRPNIFYRIVPKEQPRKQLLSFLTQHRGDAGIVYCMSRK
KVEEVAEYLSVQGFPALPYHAGLSNELRAFNQKRFLNEEGLIMVATIAFGMGIDKPNVRF
VAHLDLPKSLEAYYQETGRAGRDGLPSDAWMAYGLQDVLLLRQMMQSSEGDERHKRVERN
KLEAMLALCEETRCRRQVLLAYFDETLPEPCGHCDNCVDGVETWDATQPARQALSAIYRS
GQRYGVGHLVDILLGRENDKIKSLGHERLAVFGLGKSLAEDEWRTLFRQLVARGFADVDV
DGFGGLRLTEACRPLLRGETTLELRRDPKPQRTRGNNSGPSAASQLVRSEERQQWEALRT
LRRKLAEEHGVPPYVIFPDATLLEMLRGQPRTLHDMGRISGVGARKLERYGQAFLDVLTD
APAALEPVADVRHEVITLVRAGMTPPQISRQLSCSEKNVYSILAEAIARQQLSLDQALEL
PDDLVGEIQDAFLEEEGDLPPAAALADRFAGQVPVGVLYCIRAALAAELAE
NT seq
2136 nt
NT seq
+upstream
nt +downstream
nt
atgttcgatcaagctttgcgtattcttaaagacgtttttggttatgacgcgttccgtggc
aatcaggcccggatcatcgagcgcgttgccaacggcggagatgcgctagtgctcatgcct
acaggtggcggcaaatccctgtgttatcaggtacccgccttgttgcgtgaggggctgacc
gttgtcgtctcgccactgatcgccttgatggatgatcaggttgcgacgctggatgaacta
ggcgtgccagcggtcgcgctcaattcgacgctttcgcccgaggcacagcgcgacattgct
gcacggcttgagcgcggcgagatcaagctcttgtacctggcgccggagcgtctggtgcag
ccgcgcatgctgaatttcctgcagcgactcggcaacattgcactattcgccatcgacgag
gcgcactgcgtttcccagtgggggcacgattttaggccagagtatctgcagcttggccaa
ttggcagagcagtttcccgatgtgccacgcattgccttgaccgctacggcagacatgcgt
acccgggatgaaatgattcagcgattgcatctgcagaatgccgagcagtttctatccagt
tttgaccgacccaacattttctaccgtattgttcccaaggagcagcctcgcaagcagttg
ttgtcgtttctgacgcagcatcggggtgatgcgggcattgtttactgcatgtcgcgtaaa
aaggtcgaggaggtagctgagtacctttctgtgcagggttttcccgccttgccttaccat
gcagggctttccaacgagctgcgtgcgtttaaccagaaacgtttcctcaacgaagaaggg
ctcatcatggtcgcgactattgcctttggcatgggcatcgacaagccgaacgttcgcttt
gtcgcgcacctggatctgcccaagagtctggaagcgtattaccaggagactggacgagca
gggcgggatggtttgccctctgatgcctggatggcttatggattgcaggatgtcctgctg
cttcgccagatgatgcaaagctccgaaggggatgagcgtcataagcgcgtagagcgcaac
aaactcgaagccatgctggcattgtgcgaagagacacgctgccgccggcaggtactgctg
gcctatttcgatgaaacattgcctgagccctgtgggcattgtgataattgcgtagatggt
gtcgaaacctgggatgccacccagccggctcggcaggcattgtcagccatctataggagc
ggtcagcggtatggcgtaggccatctggtcgatatcctgctggggcgagaaaatgacaag
atcaaaagtctggggcatgagcgtctggctgttttcggccttggtaaatcgctggctgaa
gatgaatggcgaaccctctttcgtcagctggtagcgcgtggtttcgctgacgtggatgta
gacggctttggtggtctccgtctgacggaggcatgccgtccgcttctgcgtggggagacg
acgctcgagctacgccgtgatcccaagccgcagcgtacacgtggtaacaattccggcccc
agcgcagccagccaattggtacgctctgaagagcgtcagcagtgggaggccctgcgtacg
ctgcgtcggaaacttgcagaagagcacggagtgcctccttatgtcattttcccggatgca
accttgttggaaatgttgcggggacagccacggaccttgcacgatatggggcgtatcagt
ggtgtgggcgcgcgtaagcttgaacggtatggccaggcttttcttgatgtgctgacagac
gccccagcagcactggagcctgttgccgatgttcgtcatgaggtcattaccctggtccgt
gcgggtatgacgcctccgcaaatctcacggcagctttcctgctctgagaaaaatgtttac
agcattctggcggaggccattgcacgacagcagctttccctggatcaggcgcttgagctg
cccgatgatcttgtaggcgaaattcaggatgcgtttttggaggaagagggtgacttgcct
ccagcagcagcgctggcggatcgattcgctggccaggtgccggtcggcgttttgtattgc
ataagggctgcactggctgcagagctcgcagagtga
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