Pseudomonas luteola: FOB45_15560
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Entry
FOB45_15560 CDS
T06601
Symbol
kdgR
Name
(GenBank) DNA-binding transcriptional regulator KdgR
KO
K19333
IclR family transcriptional regulator, KDG regulon repressor
Organism
plul
Pseudomonas luteola
Brite
KEGG Orthology (KO) [BR:
plul00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
plul03000
]
FOB45_15560 (kdgR)
Transcription factors [BR:
plul03000
]
Prokaryotic type
Helix-turn-helix
IclR family
FOB45_15560 (kdgR)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IclR_C
HTH_IclR
HTH_11
HTH_5
TrmB
HTH_23
MarR_2
HTH_24
HTH_29
MCM_C
HTH_20
RPA_C
Fe_dep_repress
HTH_22
HTH_36
HTH_6
FUR
HTH_27
Sigma70_r4_2
Dimerisation
HTH_45
DUF5817_CT
HTH_17
Rrf2
HTH_38
HTH_7
PadR
HTH_28
DUF4423
HTH_Crp_2
MarR
WHD_MCM8
HTH_34
HTH_69
dnstrm_HI1420
HTH_Cmi2_C
DUF7342
TetR_N
HTH_30
Motif
Other DBs
NCBI-ProteinID:
QEU29099
LinkDB
All DBs
Position
1:1761107..1761895
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AA seq
262 aa
AA seq
DB search
MDSPTTNNESVTAVSRTMAVLEALGQCPEESGVSEIAQKLDMSKSTVYRFLQTLKSLGYV
VQDSEDRYRLSVRLFELGSKALPHIDLVREAEPGMRTINELTSETVHLGILDEDNIVYVH
KIDSRYNLRMYSRIGLRAPLYCTGIGKVLMAWRDEQDVRKRLASETFQPRTANTLSSLEA
YLEELALIRSQGYGEDKEEFEENMRCLAAPIHDRFGHVVAGMSVSFPCFRFREELKDEYV
QELLKTAQVISRRLGCPESMFN
NT seq
789 nt
NT seq
+upstream
nt +downstream
nt
atggatagtcccactaccaataatgaatctgtaaccgcggttagccggaccatggctgtt
ctggaagcgctgggtcagtgccctgaagaaagtggcgtttcagaaattgcgcaaaagctg
gacatgtctaagagcaccgtctaccgctttctacagacccttaaatcactggggtatgtc
gtacaggacagcgaggatcgttatcgcctcagcgtgcggctgttcgaactgggcagtaag
gcgttgccgcatattgatcttgtgcgtgaagccgagcccggcatgcgtaccatcaatgag
cttacgagcgaaacagtgcatctaggcattctcgatgaggacaatatcgtttatgtccac
aagatcgactcgcgctacaacctgcggatgtactcgcggatcggcttgcgtgcgccgctt
tattgcacaggtattggcaaggtactgatggcctggcgcgacgaacaggatgtacgcaag
cgcctggcgagcgagaccttccagcctcgtacggccaatactttgtcgagtctggaggcg
taccttgaggagctggcacttatccgcagtcagggatacggtgaggacaaagaagaattc
gaagagaatatgcgctgccttgccgcgcccatccatgaccgcttcggccatgtcgttgct
ggaatgagtgtttccttcccctgctttcgcttcagagaagaactcaaggacgaatacgtt
caggaattactaaaaacagcccaggtcatttcgcgccgcttgggttgccccgaaagcatg
tttaactaa
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