Pseudomonas luteola: FOB45_17835
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Entry
FOB45_17835 CDS
T06601
Symbol
rapA
Name
(GenBank) RNA polymerase-associated protein RapA
KO
K03580
ATP-dependent helicase HepA [EC:5.6.2.-]
Organism
plul
Pseudomonas luteola
Brite
KEGG Orthology (KO) [BR:
plul00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
plul03021
]
FOB45_17835 (rapA)
Transcription machinery [BR:
plul03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
FOB45_17835 (rapA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RapA_C
Tudor_1_RapA
Tudor_RapA
Helicase_C
SNF2-rel_dom
ResIII
DEAD
Cas3-like_C_2
AAA_34
Motif
Other DBs
NCBI-ProteinID:
QEU29519
LinkDB
All DBs
Position
1:2260283..2263105
Genome browser
AA seq
940 aa
AA seq
DB search
MAQYQPGQRWISDSEAELGLGTILAQDGRLLTVLYPATGETRQYAQRNAPLTRVRFAPGD
EITHFEGWKLTVREVEENEGLLTYHGLNAKNEPRTMTEAELSNFIQFRLASDRLFAGQID
PLSWFSLRYHTLEHSSRLLQSPLWGLAGARAQPIPHQLHIARSVADRIAPRVLLADEVGL
GKTIEAGLVIHRQLLSGRARRILILVPENLQHQWLVEMRRRFNLEVALFDSERFRASDAT
NPFEDNQIALVSLDWLKRDERAQDAAFAAGWDLMVVDEAHHLVWHPEQVSPEYALVEQLA
EVIPGVLLLTATPEQLGQDSHFARLRLLDPNRFHDLEAFRNESANYRPVAEAVQELLDHG
TMSDASRVAIHGFLGEEGDTLLTSAAAGDEEARSRLIRELLDRHGTGRVLFRNTRAAVLG
FPERNLDASALPFPDQYMDASASLYPETLYVPEDENDRWWRHDPRVEWLIETLKGLKKFK
VLVICAHAETALDLEDALRLRSGIPATVFHERMSILERDRAAAYFADEEFGAQVLICSEI
GSEGRNFQFAHHLVLFDLPAHPDLLEQRIGRLDRIGQRHTIQLHVPYLEGSAQERKFQWY
HHALNAFLSTCPTGNTLEQRFGEQLNTLLPGGDEDSWQALLEEGRRTREALEAELHTGRD
RLLELNSSGSGEGEELQEAILEQDDEFALPIYMEKLLDAFGVDSEDHSDNALILKPSEKM
LDAGFPLGNDEGVTITYDRDLALAREDMQFLTWEHPMVQGGMDLVLSGSMGNTAVALIKN
KALKPGTVLLELLYVSEAVAPRSLQLTRFLPPIALRCLLDANGNDLAARVSFETLNDQLE
SVPRGSANKFVQAQRDALSKLVAAGEGKVLPRHNERVELARQRFVANMDEELARLTALQA
VNPSVRDTEIDTLRQQREEGITHLDKASLRLESIRVLVAG
NT seq
2823 nt
NT seq
+upstream
nt +downstream
nt
atggcgcagtatcaacctgggcaacgttggatcagtgacagtgaagccgagctggggctc
ggtaccatcctggcacaggatggacgccttctgaccgtactgtatccggctaccggagaa
acacgccagtatgctcaacgcaacgcacccttgacccgcgtacgcttcgcaccaggtgat
gaaatcacccactttgaaggctggaaactcaccgttcgtgaggtggaagaaaacgaaggc
ctgctcacctatcacggtttgaatgccaaaaacgaacctcgcacgatgaccgaggctgaa
ctgtccaactttattcagttccgtctggcaagtgatcgtcttttcgcaggtcaaatcgac
ccgctttcctggttcagcctgcgttaccacacacttgaacacagcagtcgtctcttacaa
tcgccactctgggggctggcaggcgctcgagcccaacctatcccacaccagctgcatatt
gcccgtagtgtagctgaccgtattgctccacgtgtccttttggccgacgaagtgggcctt
ggcaagacgatcgaagcaggtcttgttatccatcgccagctgctcagtggtcgtgcgcgt
cgcattctgattcttgtgcctgaaaacctccagcatcagtggctggtagagatgcgccgg
cgcttcaatctggaagtcgccctgttcgattcagagcgcttccgcgccagtgacgcgacc
aatccctttgaagataatcagattgctttggtctctttggactggctaaagcgtgatgag
cgcgcccaggacgccgcgtttgcagccggctgggaccttatggttgtggatgaagcccat
caccttgtatggcacccggaacaggtaagtcccgaatatgctctggtcgagcagctggct
gaagtcatccctggcgtcctgcttctgaccgctacgcccgaacagcttggtcaagacagc
cactttgcccgcctgcgcctgctggatcctaatcgcttccacgatcttgaagcattccgt
aatgaaagtgccaattaccgcccggttgccgaagctgttcaagagctgctggaccacggt
acgatgagcgatgcttcacgtgttgccattcatggcttcctgggcgaggaaggcgatacg
ctgcttacatccgctgcggctggtgacgaagaggctcgttcacgccttattcgtgagctg
ctggaccgtcacgggacaggtcgggttcttttccgtaatactcgcgccgcagtgctgggc
tttccagagcgaaacctggatgcatcagccttgcccttcccagatcagtacatggatgcc
agcgcctcgctgtatcctgaaacactgtatgttccagaggatgaaaacgatcgctggtgg
cgccatgacccacgtgtagagtggctgattgaaaccctcaaaggcttgaaaaaattcaag
gttctagtcatctgcgcacatgcagagactgcactggatttggaagacgccttgcgactg
cgctcgggcattccggccacggttttccatgagcggatgagcattcttgagcgtgaccgg
gctgccgcctacttcgctgacgaagaatttggggcgcaggtactgatctgctctgaaatt
ggtagtgaaggacgcaacttccagtttgcccatcatctcgtgttgttcgatctacccgcg
caccctgacttgctggagcagcgaatcggccgtttggaccggatcggtcagcgccacact
attcagctgcatgttccttacctcgaaggtagcgcacaggagcgcaagttccagtggtac
caccatgcactgaatgcgtttctgtcaacctgccctaccggcaatacgctagagcagcgc
ttcggtgaacagctcaacacgctgctccctggtggagatgaggacagctggcaagctctg
cttgaagagggtcgccgcacacgtgaagcacttgaagccgagctgcatacaggccgcgat
cggttgcttgagcttaactccagtggctccggcgaaggtgaagagcttcaggaggcgatc
ctggaacaggatgacgagtttgcactgccgatctatatggagaagctattggatgccttt
ggcgtcgacagcgaagaccactccgataatgcgctcatcctcaagcccagcgaaaaaatg
ctcgatgcaggcttccccctgggtaacgatgaaggcgtgacgattacctatgaccgggat
ctggccctggcacgtgaagacatgcagtttcttacctgggagcaccccatggtccagggc
ggcatggaccttgtgctatcaggctcgatgggcaacacggcagtagcgctgatcaagaac
aaggcactcaagcctggcacagtactgcttgaactgctttacgtcagcgaggcggtagcc
ccacgttcacttcagttgactcgcttcctgcccccaattgcccttcgctgcctgctggat
gcaaacggcaatgatctggctgcacgcgtttcgttcgagacgcttaatgatcagctggaa
agcgtaccacgcggaagcgccaacaagtttgttcaagcccagcgtgacgccttgagcaaa
ctcgtggcggctggcgaaggcaaggtattgcctcgtcataacgagcgcgtcgaactggca
cgtcagcgtttcgttgccaacatggacgaggagctggctcgcttgacggcattgcaagcc
gtcaacccaagtgttcgtgatactgaaatcgacaccctgcgtcagcagcgtgaagaaggt
attacccatttggacaaagcatcgctacgccttgaatccatacgggttctagtagctggt
tga
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