Pseudomonas luteola: FOB45_19010
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Entry
FOB45_19010 CDS
T06601
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
plul
Pseudomonas luteola
Pathway
plul03410
Base excision repair
plul03430
Mismatch repair
plul03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
plul00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
FOB45_19010 (recJ)
03430 Mismatch repair
FOB45_19010 (recJ)
03440 Homologous recombination
FOB45_19010 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
plul03400
]
FOB45_19010 (recJ)
DNA repair and recombination proteins [BR:
plul03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
FOB45_19010 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
FOB45_19010 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
FOB45_19010 (recJ)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
RecJ_OB
DHHA1
Glyco_transf_4
Motif
Other DBs
NCBI-ProteinID:
QEU29738
LinkDB
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Position
1:complement(2510277..2511992)
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AA seq
571 aa
AA seq
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MRIELRSLPDELPDLGDLPPLLTRLYAARGVKSADELEKGLARLHPYRLFKGMDDAIELL
VDALAKRQRILVVGDFDADGATATSVAVLALRSLGAAWVDYLVPNRFEYGYGLTPEIVAV
ARERQPDLLVTVDNGISSIDGVEAAKAAGMRVLVTDHHLPGHELPAAHAIVNPNQPACEF
PSKCIAGVGVIFYVMLALRTRLREEGWFDALNIKEPNLAELLDLVALGSVADVVPLDANN
RILVHQGLARIRAGRARPGLRALLEVAGRQPGKITSTDLGFILGPRLNAAGRLDDMSLGI
ECLLCEDEALARDMAVQLDQLNKDRKLIEQGMQREALAQLKELPKDDMPFGLCLFDPEWH
QGVIGILASRLKERYHRPTLAFADAGDGMLKGSARSVPGFHIRDALDAVAARHPGLITKF
GGHAMAAGLSLPQENFGAFAAAFDAEVRRHLVEDDLTGRLQSDGSLETCDFQLEIARALK
HAGPWGQHFPEPMFHGVFEVVQQRIVGERHLKLVLKSECGSIQLDGIAFNINREIWPNPQ
IRWVEAAYRLDVNEFRGQESVQLIVVHLTPK
NT seq
1716 nt
NT seq
+upstream
nt +downstream
nt
atgcgtatcgaacttcgttccctgccggatgaattgcccgatctgggtgatcttccgccg
ctactgacccgtctttatgccgcgcgtggcgtgaagagtgctgatgagcttgaaaaaggg
ctggctcggttacatccctatcggttgttcaaggggatggatgacgccatcgaattgctg
gtcgatgcgctggccaagcgtcaacgcattctggtcgtgggtgattttgacgctgatggc
gcaaccgctaccagtgtggcggttcttgccttgcgcagtctgggtgccgcctgggtcgat
taccttgttcctaatcgctttgaatacggttatgggctgacacctgaaatcgtcgcggtt
gcccgggagcgccagcctgacctgctggtgaccgtggataacggaatttccagcatagac
ggtgtcgaggctgccaaagccgcaggaatgcgcgtgctggtgaccgaccaccatttgccg
ggccatgagttacctgctgctcatgcgatcgttaaccccaaccagcctgcctgtgagttt
cccagcaagtgcattgctggcgtgggcgttatcttctacgtgatgcttgcactgcggacg
cggctgcgtgaagagggctggttcgatgcgctgaacatcaaagaacctaatctggctgag
ctgctggatctggtcgcactgggcagtgttgccgacgtggtcccgctggacgccaataac
cggattctggtccatcagggattagctcgtatacgtgccggtcgcgctcgtccggggctt
agagcattgctggaggtagctgggcggcagccgggtaagattacttctactgacctggga
ttcattctggggccgcgcctgaatgcggctgggcggctggatgatatgtcgcttggaatc
gagtgcctgctgtgcgaggacgaagcccttgcacgggacatggctgtccaactggaccag
ctcaataaggatcgaaaactgatcgagcagggcatgcagcgtgaggccttggcgcagctc
aaggaattgcccaaggatgatatgccgttcgggttgtgcctgtttgatcccgaatggcat
cagggcgtcattggtattctggcgtctcgtctcaaggaacgttaccaccggcccacgctg
gcctttgccgatgccggtgacggcatgctcaagggctcggcacgttcggttccggggttt
catatccgtgatgcgctggatgctgttgcggcgcgtcatcctgggctaatcactaagttc
ggcgggcacgccatggcagcggggctgtcactgcctcaggagaatttcggtgcgtttgct
gccgctttcgatgcggaagtcagacggcatctagtcgaggatgatctgacagggcgtttg
cagtcggatggttcgctggaaacttgcgattttcaactggagattgcacgtgcactcaag
catgccggcccctgggggcagcatttccccgagccgatgtttcacggtgtgtttgaagtt
gtgcagcagcgtattgtgggtgagcggcatttgaagctggtcttgaagagtgagtgcggc
agcatccagctggacggcattgcgttcaacatcaatcgcgagatctggccgaatccgcaa
attcgctgggtcgaagccgcctaccgcctggatgtgaacgaatttcgtggtcaggaaagc
gtgcagctgattgtggttcacctgacgcccaagtga
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