Pseudomonas luteola: FOB45_19450
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Entry
FOB45_19450 CDS
T06601
Symbol
recD
Name
(GenBank) exodeoxyribonuclease V subunit alpha
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
plul
Pseudomonas luteola
Pathway
plul03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
plul00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
FOB45_19450 (recD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
plul03400
]
FOB45_19450 (recD)
Enzymes [BR:
plul01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
FOB45_19450 (recD)
DNA repair and recombination proteins [BR:
plul03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
FOB45_19450 (recD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
RecD_N
AAA_30
AAA_11
UvrD_C_2
Helicase_RecD
SH3_13
Viral_helicase1
AAA_22
UvrD-helicase
TraI_hel_assoc_N
SLFN-g3_helicase
AAA_16
AAA_17
AAA_28
Mg_chelatase
AAA_25
nSTAND3
NTPase_1
T2SSE
AAA_5
Motif
Other DBs
NCBI-ProteinID:
QEU31348
LinkDB
All DBs
Position
1:complement(2600648..2602642)
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AA seq
664 aa
AA seq
DB search
MADLFLLLDRWMERGWLRPLDRAFVSFLYELDGQSQPSVMLAAALTSHQLGHGHVCLDLA
ETLGNPDMALSLPPEGDEDRQPVLLPSEVLTALNVKHWLNALESSPIVAIGQVDDCPLVL
DGQRLYLRRYWSYERRVSECLRLRLSGLGSVPDDLCTRLAALFPERPLIDGKNVTDWQKL
ACALAARGAFSIITGGPGTGKTTTVVRLLALLQAPAVEKGTPMRIRLAAPTGKAAARLTE
SIGRQVQSLGVSEAVRPHIPVDVTTVHRLLGSRPDTRHFRHHVSNPLPLDVLVVDEASMI
DLEMMACLLDALPQHARLILLGDKDQLASVEAGAVLGDLCRDAELGYYTPETRAWLEEIC
EECLSDESLEDGHEEHHALAQQVVMLRHSRRFNSSSGIGQLARRVNLQEASGARELLVKK
TYDDLFCLRLRDAEDRALEKLVLEGHSPKGPHGYRHYLRVMQALRPSYDLPMDDPVWEVW
AKDVLDAFDEFQLLCAVRKGPWGVEGLNQRIAKALLSAGLISQDQGWYEGRPVLVTKNDY
SLNLMNGDIGIALCMPEPANRSGKAIRVAFPRNDGSGGLRFILPSRLSAVETVFAMTVHK
SQGSEFAHTALILPDTISPVLTKELIYTGITRARDWFSLIESKTGVFEEAVSRRVRRLSG
LMLM
NT seq
1995 nt
NT seq
+upstream
nt +downstream
nt
atggcagacctatttttgttgctggatcgatggatggagcgagggtggcttaggccgttg
gaccgcgcctttgtatcctttctttatgagctcgacgggcagagccagccgagcgtgatg
ctggcagcggcattgaccagccatcagctgggccatgggcatgtgtgtctggatctagcc
gaaaccttgggcaacccggacatggctctgtcgctgcctcccgaaggtgatgaggatcga
cagcccgttctgctcccttctgaggtgctgactgctctcaacgtaaagcactggttgaat
gcactggagagcagccctatcgtggccatcggtcaggtggatgactgtccgctggtgctc
gatggccagcggttatatctgcgccgttactggagctatgagcgccgtgtcagcgaatgc
ctgcggctgcgtctctccggcctggggtctgtgccggatgacctttgcacacgcttggct
gcgctgtttcccgagcgtccattgatcgatggcaagaacgtgaccgactggcagaagctg
gcctgtgccctggcggcgcgaggcgcgttcagcatcatcaccggcggtccgggtaccggc
aagaccactacagttgtccggcttcttgcgctgcttcaggctccggctgtcgagaaggga
acgcccatgcgtatccgcctggcggcgccaacaggcaaggctgccgcccggctgaccgaa
tccattggacgacaggtgcagtcattgggtgtaagcgaggccgtgcgtccgcatattcct
gtggacgttactacggtgcaccggctgcttggcagtcgcccggatacccgtcatttccgt
catcacgtcagcaacccgctgccgctggatgtgctggtcgtggatgaggcgtccatgatc
gatctggagatgatggcctgcctgctcgacgcacttccgcagcacgcgcggctgatcctg
ctgggcgataaggatcagctggcctcggtcgaggcaggcgccgttctgggcgatctgtgc
cgtgatgccgagctgggctattacacgccggaaactcgcgcgtggctggaggaaatctgc
gaggaatgcctgagcgacgaatcgctggaagacggtcacgaggagcatcatgccctggca
cagcaggtcgtcatgctacgtcattctcgccggttcaattccagcagcggtatcggccag
ctggctcgccgggtaaatcttcaagaggccagcggtgcacgtgagctgctagtcaaaaag
acctatgatgacctgttctgcctgcggctgcgtgatgccgaagacagggcgctggaaaag
ctggtgctggaaggtcattcacccaaagggcctcatggctaccgacattacctgcgtgtg
atgcaggcgcttcggcccagttacgacctgccaatggatgatcctgtctgggaagtctgg
gctaaggacgtgctggatgccttcgatgagttccaactactctgtgcggtacgtaaagga
ccgtggggtgtggagggacttaaccagcggatcgccaaggcgttgctcagtgccgggctt
atcagccaggaccagggctggtacgagggccgtccggtactcgtgaccaagaatgactac
agcctgaacctcatgaatggcgatatcggcattgccttatgtatgcccgagcctgccaat
cgatcaggcaaggcaatccgggtcgcattcccgcgcaacgacggtagcggcggtctgcgc
ttcattttgccgagccggttatctgccgtggaaaccgtgtttgccatgacagtacacaag
tcccagggctccgagttcgcgcatacggcgctgatcctgccggatacgatcagcccagtg
ctgaccaaggagctgatctataccggtatcacccgggcccgggactggttcagcttgatc
gaatctaaaacaggcgtttttgaagaggcggtgtcccgccgggtcaggcgcttgagtggg
ttgatgctgatgtaa
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