Pseudomonas luteola: FOB45_22930
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Entry
FOB45_22930 CDS
T06601
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
plul
Pseudomonas luteola
Pathway
plul03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
plul00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
FOB45_22930 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
plul03019
]
FOB45_22930 (pnp)
03016 Transfer RNA biogenesis [BR:
plul03016
]
FOB45_22930 (pnp)
Enzymes [BR:
plul01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
FOB45_22930 (pnp)
Messenger RNA biogenesis [BR:
plul03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
FOB45_22930 (pnp)
Transfer RNA biogenesis [BR:
plul03016
]
Prokaryotic type
tRNA degradation factors
FOB45_22930 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
PNPase
RNase_PH_C
S1
KH_1
S1_RRP5
OB_RRP5_4th
KH-I_KHDC4-BBP
S1_2
Motif
Other DBs
NCBI-ProteinID:
QEU30459
LinkDB
All DBs
Position
1:complement(3371440..3373545)
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AA seq
701 aa
AA seq
DB search
MNPVIKTFKFGQQTVTLETGRIARQASGAVLVSTEDVSVLVTVVGAKSPAEGRDFFPLSV
HYQEKTYAAGRIPGGYFKREGRPSEKETLTSRLIDRPIRPLFPEGFMNEVQVVCTVVSTN
KKSDPDIAAMIGTSAALAISGIPFAGPIGAARVGFHPELGYIINPSYEQLQSSSLDMVVA
GTSDAVLMVESEADELTEDQMLGAVLFAHEEFQVVIEAIKAFAAEAGKPTWNWQAPVENT
ALVNQLRAEFGEAISQAYTITIKQDRYAALGELRDQAVAKFAGEEEGQYSTAEVKEIFGL
LEYRTVRENIVGGKPRIDGRDTRTVRPLNIEVGVLPKTHGSALFTRGETQALVATTLGTA
RDAQILDMLEGERRDTFMLHYNFPPFSVGECGRMGSPGRREIGHGRLARRGVQAMLPSQE
EFPYSIRVVSEITESNGSSSMASVCGASLALMDAGVPVRAPVAGVAMGLVKEGDRFAVLT
DILGDEDHLGDMDFKVAGTDKGVTALQMDIKINGITEEIMEVALAQALEARLNILSQMNQ
VIAKPRAELSANAPTMIAMKIEPDKIRDVIGKGGAVIRGICEETKASIDIEDDGSVKIYG
ETREAAEAAKQRVLGITAEAEIGKIYVGKVERIVDFGAFVNILPGKDGLVHISQISDQRI
EKVSDVLKEGQEVKVLVLDVDNRGRIKLSIKDVAAAEASGA
NT seq
2106 nt
NT seq
+upstream
nt +downstream
nt
gtgaatccagtaatcaagacattcaaattcggtcagcagaccgtaaccctggagacgggc
cgtattgcgcgtcaggccagtggtgcagtacttgtcagtactgaagacgttagcgttctg
gtcactgttgtaggcgccaagtctccagcagaaggccgtgacttcttcccgctgtctgtc
cactatcaggaaaagacgtatgcggcaggtcgtatccccggtggctatttcaagcgtgaa
ggtcgtccaagcgaaaaggaaacattgacctcccgcctgatcgatcgcccgattcgtcct
ctattccccgaaggcttcatgaacgaagtacaggttgtctgtactgtagtttctaccaac
aagaagtctgatccggatattgctgccatgatcggtacttctgccgctctggctatttcc
ggcattccgttcgcgggcccgattggtgctgcacgcgtagggttccacccagagctgggc
tatatcatcaacccaagctatgagcagcttcagagttccagcctggacatggttgtcgca
ggtacctctgacgcggttctaatggttgagtccgaagcggacgagctgactgaagaccag
atgctgggcgctgtactgtttgcccatgaagagttccaggttgtcatcgaggcaatcaag
gcatttgctgctgaagcaggcaagcctacgtggaactggcaagctccggtcgagaacaca
gctttggttaaccagctgcgtgccgaatttggtgaggcaatctctcaggcttataccatt
accatcaagcaggaccgttatgcggctctgggtgagctgcgcgatcaggctgtggccaag
tttgcgggtgaggaagagggtcagtacagtaccgccgaggtcaaggaaatttttggcctg
ctggaatatcgcactgtacgtgagaacatcgtaggcggtaagccgcgtatcgatggtcgt
gatacccgtactgttcgtccgctgaatattgaagtgggtgtgctgcctaagactcacggc
tccgcactgtttacgcgtggtgaaactcaggcgctggtagcgactaccctgggtactgcc
cgcgatgctcagatcctcgacatgctggaaggcgagcgccgtgacacctttatgctgcac
tacaacttcccgcctttctcggtcggtgagtgcggacgtatgggtagcccaggccgccgt
gaaatcggtcatggccgtctggcacgccgtggtgtgcaggctatgctgccttctcaggaa
gagtttccctacagcattcgtgttgtttcagagatcactgagtcaaacggctcaagctcc
atggcttctgtctgcggtgcctcgttggcattgatggatgctggtgttccagttcgcgct
ccggttgctggcgttgcgatgggcctggtaaaggaaggcgacagatttgctgttctgacc
gatattctaggtgatgaagatcaccttggcgatatggacttcaaggtggccggtactgac
aagggcgttaccgctctgcagatggacatcaagatcaacggtattaccgaagagatcatg
gaagtcgctttggctcaggctctagaggctcgcctcaatatcctgtcccaaatgaatcag
gtaatcgccaagccgcgtgcagagctgtctgccaatgctccgaccatgattgccatgaag
atcgagccggacaagatccgcgacgtcatcggtaaaggcggcgctgttattcgtggaatc
tgtgaagaaaccaaggcgtcgatcgacatcgaagatgatggcagcgtcaagatttacggc
gaaacccgtgaagctgccgaggccgccaaacagcgcgttctgggtattactgcagaagct
gaaatcggcaagatttacgttggtaaggtcgagcgcattgtcgatttcggtgcgttcgta
aatatcctgcctggtaaagatggtctggtacacatttctcagatcagcgatcagcgcatc
gagaaggtttccgatgtactgaaagaaggacaggaagtgaaggtattggtattggacgtg
gataaccgcggccgtatcaagctctctatcaaggatgtcgcagcagctgaagcttctggc
gcctga
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integrated database retrieval system
