Pseudomonas luteola: FOB45_23525
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Entry
FOB45_23525 CDS
T06601
Symbol
rho
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
plul
Pseudomonas luteola
Pathway
plul03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
plul00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
FOB45_23525 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
plul03021
]
FOB45_23525 (rho)
03019 Messenger RNA biogenesis [BR:
plul03019
]
FOB45_23525 (rho)
Transcription machinery [BR:
plul03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
FOB45_23525 (rho)
Messenger RNA biogenesis [BR:
plul03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
FOB45_23525 (rho)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
OB_RNB
AAA_22
AAA_25
NACHT
S1CSD-TOTE-2
AAA
Mor
Motif
Other DBs
NCBI-ProteinID:
QEU30565
LinkDB
All DBs
Position
1:complement(3488991..3490250)
Genome browser
AA seq
419 aa
AA seq
DB search
MNLTELKQKPITELLEMAEAMGLENMARSRKQDVIFSLLKKHAKSGEEISGDGVLEILQD
GFGFLRSADSSYLAGPDDIYVSPSQIRRFNLRTGDTIIGKIRPPKEGERYFALLKVDTIN
YDRPENAKNKILFENLTPLFPNKRLTMEAGNGSTEDLTGRVIDLCAPIGKGQRGLIVAPP
KAGKTLMLQNIASNITRNNPECHLIVLLIDERPEEVTEMQRTVRGEVVASTFDEPPTRHV
QVAEMVIEKAKRLVEHKKDVVILLDSITRLARAYNTVIPSSGKVLTGGVDAHALEKPKRF
FGAARNIEEGGSLTILATALVDTGSKMDEVIYEEFKGTGNMELQLDRKISEKRVFPAINI
NRSGTRREELLTGEEELQRIWILRKILHPMEEIGAIEFLLDKLRQTKTNDEFFDSMKRK
NT seq
1260 nt
NT seq
+upstream
nt +downstream
nt
atgaaccttaccgaactcaagcaaaagccaatcacggaactgttggaaatggcggaagcc
atgggcctggaaaacatggctcgctcccgcaagcaggacgtgattttctctctgctgaaa
aaacacgcaaaaagcggtgaagagatttccggtgatggcgtgctggagattctgcaggat
ggcttcggcttcctgcgtagtgcggactcctcctacctggccggccccgacgatatctac
gtctctcccagtcagatccgccgtttcaatctgcgcaccggtgataccatcatcggcaag
attcgcccgccgaaagaaggcgagcgttacttcgcgctgctcaaggtcgataccattaac
tatgatcgacccgagaatgcgaagaacaagatcctgttcgaaaacctgacgccgctgttc
cccaacaagcgcttgacgatggaagccggtaatggttccaccgaagacctcaccggccga
gtgatcgacttgtgtgcgccgattggcaaaggccagcgtggtctgatcgtcgctccgccg
aaagcgggcaagacgctgatgctgcagaacatcgccagcaacatcacccgtaacaacccc
gagtgccacctgatcgttctgttgatcgacgagcgcccggaagaagtaaccgaaatgcag
cgtaccgtgcgcggcgaagtagtggcgtccacctttgacgagccgccaacccgccacgta
caggttgctgaaatggtaatcgagaaggccaagcgtctggtcgagcacaagaaagacgtg
gtaatcctgttggactccattacccgtctggcacgtgcctacaacaccgtgatcccgagc
tccggcaaggtactgaccggtggtgtggacgcccatgcgctcgaaaagcccaagcgtttc
ttcggtgcggcacgtaacatcgaagaaggcggtagcctgaccattctggcaacagctctg
gtcgataccggctcgaagatggacgaggtcatctacgaagaattcaagggtaccggtaac
atggagcttcagctggatcgcaagatctccgagaagcgcgtattccccgctatcaacatc
aatcgctccggcacccgccgcgaagagttgctgaccggtgaggaagagctgcagcgcatc
tggattctgcgcaagatcctgcatccgatggaagagatcggtgccatcgagttcctgctc
gataagttgcgtcagaccaagaccaacgacgagttcttcgactcgatgaagcgcaagtaa
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