Pseudomonas luteola: FOB45_24660
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Entry
FOB45_24660 CDS
T06601
Name
(GenBank) RecQ family ATP-dependent DNA helicase
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
plul
Pseudomonas luteola
Pathway
plul03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
plul00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
FOB45_24660
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
plul03019
]
FOB45_24660
03400 DNA repair and recombination proteins [BR:
plul03400
]
FOB45_24660
Enzymes [BR:
plul01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
FOB45_24660
Messenger RNA biogenesis [BR:
plul03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
FOB45_24660
DNA repair and recombination proteins [BR:
plul03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
FOB45_24660
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C
DEAD
RecQ_Zn_bind
ResIII
AAA_22
Cas3-like_C_2
SIMPL
Motif
Other DBs
NCBI-ProteinID:
QEU31410
LinkDB
All DBs
Position
1:complement(3729415..3731352)
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AA seq
645 aa
AA seq
DB search
MEQTLADVFGYTSFRPGQGQVVRTVMAGRSAAAIFPTGSGKSLCYQLPALLLPHLTLVIS
PLLALMQDQLAFLKARGIAAASIDSAQRREDIQATMARARSGELKILMISVERLKNERFR
QFIAQVPISLLVIDEAHCLSEWGHNFRPDYLKLPDYQRDFRIPQVLLLTATATPRVIADM
QARFGIAHDDVVTTGFYRPNLDLQVEPVSGEDKRRYLLDWIAPRASQSGIVYVTQQKTAE
QLADELVRAGIRAGAYHAGLPHERRDSIQQQFMAGTLTCIVATIAFGMGIDKRDIRYVVH
YDLPKSIESYSQEIGRAGRDGERSECLVLANRDALNVLENFVYGDTPELSGIRSVLEDLQ
AAPKGEWVLQFNSLSDQSDIRLLPLKTLLVQLELQGLIAPQYSYFADYRFKYLREPEALI
ERFEGERRQFVEAIVETSVRARTWCTVNFDQLHREYRAERSRVITALEWFHEQGWIELES
KQMTDVYRRLQAAIDVETLGATLHRYFQEKEQAEVARTHAMLDLFASDRCLSHRLAEWFG
DTQAPEQCGHCSVCRGTVAVLPAPAVLPPLDRQNPETLCGAFREHYMASRGGVPSVESMT
RFLCGLNTPAFTRLKARSLPGFAALEAYPYAEVRAWLAQAGFNVK
NT seq
1938 nt
NT seq
+upstream
nt +downstream
nt
attgagcaaactctggccgatgtgttcggctatacctcttttcgccctggccagggtcag
gtagttcgtaccgtcatggctggccgttcggctgctgctatctttccaaccggctcgggt
aaatcgctgtgctatcaattgcccgctttgcttctgccacacctcactctggtcatttcg
cctctgctggccctgatgcaggaccaacttgcgtttctgaaggcccgcgggatcgctgct
gccagtatcgattcggcacagcgccgtgaagatatccaagccactatggccagagcccgc
tccggtgaattgaagattctgatgatctcggtagagcggcttaagaatgaacgctttcgc
cagtttatcgcccaagtacctatctctctgttggtaatcgacgaagcccattgcctatcc
gagtggggccataattttcgtcctgactaccttaagctccctgattatcagcgtgatttc
aggatccctcaggtcttgctgctaactgcgacggcaacgcctcgggttattgcagacatg
caggcccgctttggaatcgctcatgacgatgtggtgacgaccggcttctatcgccccaat
ctggacttgcaggtcgaacctgtcagcggggaggacaaacgacgttatttgctggattgg
attgcgccacgggccagtcagtccggcattgtttatgtcacgcagcagaaaacagccgag
cagctggcggatgagttggtacgtgccgggattcgcgccggggcataccacgctggcctg
cctcatgaacggcgcgacagcattcagcagcagttcatggccggcacactgacctgcatt
gtggccaccattgcctttggcatgggaatcgacaagcgcgatatccgttacgtagtgcat
tacgacctgcccaaatcaatcgagagctatagccaggaaatcggtcgcgccggacgtgac
ggtgagcgctccgagtgcctagtactggctaaccgcgatgccttgaatgtgctggaaaat
tttgtttatggtgacacaccggagctgagtggtatccgcagcgttcttgaggacttgcag
gcggcgccgaaaggcgaatgggtgttgcagttcaacagcctgtccgatcaaagtgacatt
cgcctgttgccgctcaagaccttgctcgtacaactggagcttcagggcctgattgcaccg
caatacagttatttcgctgattatcgtttcaaataccttcgtgagcctgaagccttgatt
gaacgatttgaaggtgagcgtcggcaatttgttgaggctattgtcgaaacctctgttcgg
gcgcgtacctggtgcacggtcaattttgatcagttgcaccgtgagtatcgcgctgaacgt
agccgggtaatcactgcgctggagtggtttcacgagcaaggctggattgagctggaaagt
aagcagatgaccgatgtgtatcgtcgcttacaggctgcaatcgacgtcgagacactaggc
gctacgttgcatcggtacttccaggaaaaagagcaggccgaggttgcacgaacccacgcc
atgcttgatctattcgccagtgaccgttgcctgagccaccgtctggctgagtggtttggt
gatacgcaggcgcctgagcaatgcgggcattgttccgtctgccgcggcacggtggcagtc
cttccagctccggctgtcttaccgcctttggataggcaaaaccctgaaacgctatgtggc
gcctttcgggagcactatatggcctcccggggaggcgtacccagtgttgagtccatgaca
cggtttctatgtggcctcaacacacccgccttcactcgactcaaagccagaagcttgcct
ggttttgctgcgctggaggcttatccctatgcggaagtaagagcctggctggcccaggcc
ggctttaacgtcaaatga
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