Pseudomonas luteola: FOB45_25420
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Entry
FOB45_25420 CDS
T06601
Symbol
uvrD
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
plul
Pseudomonas luteola
Pathway
plul03420
Nucleotide excision repair
plul03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
plul00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
FOB45_25420 (uvrD)
03430 Mismatch repair
FOB45_25420 (uvrD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
plul03400
]
FOB45_25420 (uvrD)
Enzymes [BR:
plul01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
FOB45_25420 (uvrD)
DNA repair and recombination proteins [BR:
plul03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
FOB45_25420 (uvrD)
MMR (mismatch excision repair)
Other MMR factors
FOB45_25420 (uvrD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
AAA_30
AAA_11
Motif
Other DBs
NCBI-ProteinID:
QEU31420
LinkDB
All DBs
Position
1:complement(3884112..3886280)
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AA seq
722 aa
AA seq
DB search
MHDDLSLLLNSLNAAQREAVAAPLGRQLVLAGAGSGKTRVLVHRIAWLIQVEHASPHSLL
AVTFTNKAAAEMRHRIEQLLNMNPQGMWVGTFHGLAHRLLRAHWQEAKLSQNFQILDSDD
QQRLVKRVIRDLGLDEQRWPARQAQWFINGQKDEGLRPQHIQASGDLFLATMRSIYEAYE
AACARAGVIDFSELLLRALELWRDNPDLLAHYQRRFRHVLVDEFQDTNAVQYAWLKLLAQ
GGESLMVVGDDDQSIYGWRGARIENIQQFNQDFSAAIIRLEQNYRSTSTILQAANGLIAN
NSDRLGKELWTDTGEGEAITLYAGFNEHDEARYIVETIESESKKGLSLSEMAILYRSNAQ
SRVLEEALLREKIPYRIYGGQRFFERAEIKNAMAYLRLICHRHDDAALERVINVPPRGIG
EKTVEILRNTARTNGYSMWQALHDAVGTKSVSGRAASSLNAFVELIYELGLRSEDVPLHT
LTQIVIEQTGLVAYHKAEKGEKGQARVENLEELISAAKSFDFSGDDDRSPLANFLDHAAL
ESGDNQADSHEDCVQLMTLHSAKGLEFPLVFLAGMEEGLFPHKMSLEESGRLEEERRLAY
VGITRAMKRLVMTYAETRRLHGTETYNKLSRFIREVPPNLIQEVRLSNSVKQPFGVGRPN
PFAGAAIPDTTFALGQRVNHALFGEGVILNYEGSGPHARVQVNFDAEGSKWLMVSYAKLE
PV
NT seq
2169 nt
NT seq
+upstream
nt +downstream
nt
atgcatgatgacctctctctcctcctgaattccctgaatgccgcccagcgtgaagcggtg
gcggcgccccttggccgacagttagtgcttgcgggtgccggttccggcaaaacccgggtg
ctggtgcaccgtatcgcctggttgatccaggtcgagcatgcgtcgccccactcgctcctg
gcggtgacctttactaataaagccgctgccgaaatgcgccatcggatcgagcagctcttg
aacatgaatccgcaaggcatgtgggtcggcacgttccacgggcttgcccatcgtctgctc
agagctcattggcaggaagccaagttatcccagaactttcagattctggacagcgacgat
cagcagcgcctggtcaagcgggtcattcgggatctggggctggatgagcagcgctggccg
gcacggcaggcgcagtggttcatcaacggtcagaaagacgaaggcctacgtccacagcat
atccaggccagtggcgatctgttcctggccaccatgcgcagcatctacgaggcgtatgaa
gcggcgtgtgctcgcgccggcgtcatcgacttttccgagctgctgctccgtgccttggag
ctgtggcgcgataatccagacctgcttgcccattaccagcgccgtttccgccatgtgctg
gtagatgaattccaggataccaatgccgtgcagtacgcatggctcaagctgctcgcccag
ggcggcgaaagcctgatggtagtaggtgatgacgaccagtccatctacggttggcgtggc
gcgcgtatcgagaatatccagcagttcaaccaggacttctctgccgccatcattcgtctg
gagcagaattatcgctccaccagcacgattttgcaggcagccaatggcctgatcgccaac
aatagcgaccggctcggcaaagagctgtggacagatacgggtgaaggcgaagccattacc
ctttacgcgggcttcaacgagcacgatgaagcccgttatatcgtcgaaaccatcgaaagc
gaatcgaagaagggtctctcgctaagcgaaatggccattctgtatcgctccaacgcccag
tcacgggtattggaagaagcgttgctgagagaaaaaattccctatcgcatctatggcggc
caacgcttctttgaacgcgccgaaatcaagaatgcgatggcgtatctacgcttgatctgt
catcgccatgacgatgcagcgctggagcgtgtcatcaatgtcccgccccgcggcattggt
gaaaagacggtcgagatcctgcgtaacaccgcacgcacaaacggctactccatgtggcaa
gcactgcatgatgcggtcggcaccaagtcggtatccggtcgggcggcatccagtctgaat
gcctttgtcgagctgatctatgaactagggctcaggtctgaagatgtcccgctgcatacg
ctgactcagatcgtgatcgagcagacagggcttgtggcctatcacaaggctgaaaagggc
gagaaaggtcaggcacgggtcgaaaaccttgaggaattgatcagcgccgcgaagtccttt
gatttcagtggtgacgatgatcgttcgcccctggctaacttccttgaccatgcggccttg
gaatctggggataatcaggcagacagccatgaagactgtgtacagctcatgacgctgcac
agtgcgaagggtctggagtttccgctggtcttcctggctggtatggaagaaggcctgttc
cctcacaagatgagcctggaagagtccggccgcttggaggaggaacgccgcttggcctat
gtgggaattacccgggccatgaaacgtctggtgatgacctatgcggaaacgcgccggctt
catggaaccgagacttataacaagctctcgcgctttatccgcgaggtgccaccaaacctg
attcaggaagtccgcctgtccaattcggtcaagcagccgtttggcgtaggtcgacctaat
ccgtttgcaggtgccgccattccagacacgacgtttgcattgggccaacgagtcaatcac
gccttgtttggcgaaggggtcattctgaattacgagggctccggtccacatgcacgtgtt
caggtgaatttcgacgccgaaggcagcaagtggttaatggtgagttacgccaagctggaa
ccggtttaa
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