Pseudomonas luteola: FOB45_25635
Help
Entry
FOB45_25635 CDS
T06601
Symbol
tssC
Name
(GenBank) type VI secretion system contractile sheath large subunit
KO
K11900
type VI secretion system protein ImpC
Organism
plul
Pseudomonas luteola
Pathway
plul02025
Biofilm formation - Pseudomonas aeruginosa
Brite
KEGG Orthology (KO) [BR:
plul00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02025 Biofilm formation - Pseudomonas aeruginosa
FOB45_25635 (tssC)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
plul02044
]
FOB45_25635 (tssC)
Secretion system [BR:
plul02044
]
Type VI secretion system
Imp/Vas secretion system core components
FOB45_25635 (tssC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VipB
VipB_2
Motif
Other DBs
NCBI-ProteinID:
QEU30951
LinkDB
All DBs
Position
1:complement(3940011..3941486)
Genome browser
AA seq
491 aa
AA seq
DB search
MSTNTALEATQVTGEAGILDRIIAETKLTPDDEAYGIAKRGVSAFIEELLKPQNEKEPVK
KALVDRMIAEIDAKLSRQMDEILHHAEFQSLESSWRGLQMLVDRTDFRENNKVEILNVSK
QDLLEDFEDSPEIVQSGLYKHIYTAEYGQFGGEPVGAIIANYFFDPSSPDVKTMQHVASV
AAMAHAPFVAAAGPKFFGLEAFTGLPDLKDMKDHFEGPQFTKWQSFREQEDSRYVGLTLP
RFLLRTPYDPEENPVKSFVYKENVSSSHEHYLWGNTAYAFATRLTSSFAKFRWCPNIIGP
QSGGAVEDLPLHHFESMGEIETKIPTEVLVSDRREYELAEEGFIALTMRKGSDNAAFFSA
NSVQKPKFFGNSEEGKNAEMNYKLGTQLPYLFIVSRLAHYLKVLQREQLGSTKERTDLEL
ELNKWIRQYVADQENPSAEVRGRRPLRAASIKVTEVDGEPGWYRVGLSVRPHFKYMGADF
TLSLVGKLDKE
NT seq
1476 nt
NT seq
+upstream
nt +downstream
nt
atgagtaccaataccgctctcgaagcgactcaagtaacaggcgaagccggcattcttgac
cgcatcatcgccgagaccaagctcacgccagatgacgaagcctatggcatcgccaagcgt
ggcgtatctgccttcatcgaagagctgctcaagccgcagaacgaaaaagagccggtcaag
aaggccctggtcgaccgcatgatcgccgagatcgatgccaagctcagccgccagatggac
gaaatccttcaccacgccgagttccaatcgctggaatcctcctggcgtggtctgcagatg
ctggtcgaccgcaccgatttccgtgagaacaacaaggtcgagatcctgaacgtatccaag
caggacctgctggaagacttcgaagactcgccggaaatcgttcagtccggcctgtacaag
cacatctatacagccgaatacggccagttcggtggcgagccggttggcgcgatcattgcc
aactacttcttcgacccgagctctccggacgtgaagaccatgcagcatgtggccagcgtt
gcggccatggcgcatgcgcccttcgttgcggcagccggtcccaagttctttggcctggaa
gccttcacgggcctgcccgatctgaaggatatgaaagatcacttcgaaggtcctcagttc
accaagtggcagagcttccgcgagcaggaagactcccgttatgtaggcctgaccctgccc
cgcttcctgctgcgtacgccctatgacccggaagaaaacccggtcaagagctttgtctac
aaggaaaacgtctccagcagccacgagcattacctgtggggcaacaccgcgtatgccttc
gcgactcgcttgaccagcagcttcgccaaattccgctggtgcccgaacatcattggcccc
cagagcggtggcgcggtagaagacctgcccctgcaccatttcgaaagcatgggtgaaatc
gagaccaagattccgaccgaagtactggtttccgatcgccgcgagtacgagctggccgag
gaaggcttcatcgcgctgaccatgcgcaagggtagcgataacgcggcattcttctctgcc
aactccgtacagaagccgaagttctttggtaacagcgaagaaggcaagaacgccgagatg
aactacaagctaggcacccaactgccctacctgttcatcgtcagccgtctggcgcactat
ctgaaggtcctgcagcgcgagcagctgggcagcaccaaggaacgtaccgaccttgagctt
gagctgaacaagtggatccgtcagtacgtggccgaccaggaaaaccccagtgctgaggtt
cgcggtcgccgtcctctgcgcgctgccagtatcaaggtcaccgaggtggatggcgagccg
ggctggtaccgtgtcggcctgagcgtgcgtccgcacttcaagtacatgggcgcggatttc
acgctgtccctggttggcaagctggacaaagagtga
DBGET
integrated database retrieval system
