Photorhabdus laumondii subsp. laumondii DSPV002N: A4R40_01720
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Entry
A4R40_01720 CDS
T05478
Name
(GenBank) type IV secretion protein Rhs
Organism
plum
Photorhabdus laumondii subsp. laumondii DSPV002N
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Gene cluster
GFIT
Motif
Pfam:
RHS_repeat
PAAR_motif
DUF6531
Tox-ART-HYD1
CEL_III_C
Motif
Other DBs
NCBI-ProteinID:
AWK40326
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Position
complement(372677..377092)
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AA seq
1471 aa
AA seq
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MSLGDEIVTRIARVGARHAVHVSPPQGSPGPAAAREGDPIKHASFLGALAGAITGALIGA
AVFAAASALVGLTILTGGLATVAVIALGTAATFALGDVISAASSAVTNMVDSIGPPSGTL
TSGSPNVFIEGQPAARATTDIAVCSKHPAPPLIAQGSETVLINGSPAARVDDKLACGATI
KSGAKTVFIGSGQGTYLAVADEFSAWERAILIAVEFLVPPSRGALKGLGKLFTKPGQGIQ
GVLKGAKAGAKKAKALLSNRISCAKKAFRETEGAKRYREATKKFFTGDPIDVTTGQLFDQ
RTDITLGQTLPLVFLRSWVPEEQGLLGPGWTDSFSECALATGDRVEIRTTEGASLYFALP
AAYTHSVNPDHPDFTLSRGEQGYILRHRDSPVSKYFTLPHPSSASKEAPRRWLLTEHRDV
YDNRLRFIYNKHCQLTQVLHSDGPELTLLYNLRGQLTEIRRTDERLQEVMARYHYHDNGR
LAEADSTQNFHLYYEYNAQGLISRWSDGDQTWVDYRYDKQGRCTDSVGAGGFYPVHLDYA
PGITRSTTPQGHTTTGHYNDQQLITEIHTPCGGVTRYEYDRWGNLVRQILPEGETLTLTY
LADTGRVTSLTEATGAVWQYSYEADSLQLTGMTDPLQRTWLPQYDEQGQPAGFIAPDGRK
TTLTRNAFGLVTSETDPDGNSRTQEYDKHQRLVRVLDEENRTVSLGYDSQDRLRSLTAAG
ALWRWRYDRHHRVAVSDRPDNQLEHFTHDRHGNLTCWTDARGVKWQVEYGPFDLPVARRD
GEGHRWQYRYDADTLQLTQVINPQGETYSYTLDADGRVITEQDYAGTQWHYRYDRSGNCI
EKRDGEENVTRYDYDAARRLTTLHTPEGPTRYHYDSVGRLLTVDSPDSTLHFEYDGQDRI
VREIQPHGEIQRHYPDNRTAERQLLTGETAPVTGPARFSGQTHPGRWQSRREVNRVGELI
TLTLAGQAPLTIERDDAGRDTGRYVDGGFILRQQYSLMGQLTAQRAGRNPYFFRPAEPDE
IEGPAYAGVARRYEYDTALNLTAASDDGQQVNYLLNGNGQVISVGEGRTLREHYQYDETG
YPSRRFDGVQEIMGETLYQEGHRLNWVGSHRFVYDRAGRMQEKQFLAEGCRLALTKYRWN
SQNQLTGLITPDGIPWEYRYDAFGRRTEKRCIQSGKLTTYLWDGNVPAEIREYQHGRLKM
IRHLVFDGWELVAQQTQAFTLNLDNRVELMAGEVQTQYAVSAPTGEPLALFDPAGKRVWR
RPKQSLYGLRLGGYGENPQLDPGLRFAGQLFDEESGLFYNRFRYYLPEATCYLSPDPTGL
WGGENTYRYVQNPTKFIDPLGLAGENVFIHYTNKAGFDGIMKSGVLHPNVSGKVYITDVL
MSPKDVMRDLLINNPNHIGRGDYAIIFKIDPGERGNIRSPSRLEYTHEGKLKLNNILYAG
KNPYAILEHLDYDTRLKLTDNQVKIRKCGGK
NT seq
4416 nt
NT seq
+upstream
nt +downstream
nt
atgtcacttggtgatgaaatcgtcacccggatagcgcgggttggcgcccggcacgcggtg
cacgtctccccgccacagggctcccccggtccggccgccgcccgtgagggcgacccgatt
aaacatgccagcttcctgggggcgctggcgggtgccattaccggcgcactgataggggcg
gcggtctttgccgcggcatcggcactggtgggactgaccattctcaccgggggattagcc
accgtcgcggtcattgcgctgggaaccgccgccacatttgccctgggcgatgtcatcagc
gccgccagttcggccgtcacgaacatggtggacagcatcggcccgccgagcggcaccctg
acgagtggctcccccaatgtctttatcgaaggccaaccggcggccagagccaccaccgat
atcgccgtttgcagtaaacacccggcgccgcccctgattgcccagggcagtgaaaccgtg
ttgattaacggctcgccggcggcccgggtggatgacaaactggcgtgtggcgccaccata
aaatccggggccaaaacggtgtttatcggctccggtcagggaacttacctggcagtcgcc
gacgagttttccgcctgggaacgggcgatactgatagcggttgaatttctggtgccgccg
tcacgaggcgcccttaaggggctgggtaagctgtttaccaaacccggtcagggaattcag
ggggtattgaaaggcgcgaaggcgggtgctaaaaaggctaaggcgctcctctcaaatcga
atttcctgtgccaaaaaagctttcagagaaactgaaggggcaaaacgttaccgggaagcg
acgaaaaaattctttaccggcgacccgattgacgtcaccaccggccagttgtttgaccag
cggaccgacatcaccctcggccagaccctgccgctggtgtttctgcgcagctgggtgccg
gaggaacagggcttactggggccgggctggacggacagcttctccgaatgcgcccttgcc
accggcgaccgggtagaaatccgcaccaccgaaggggcttctctctattttgccttaccg
gccgcttatacccacagtgttaacccggaccacccggactttaccctgagccggggagaa
cagggatatattctccgtcaccgtgattcaccggtcagcaaatattttaccctgccccat
ccgtcatccgcctcaaaagaggcaccccggcgctggttgctgacggaacaccgggacgtg
tatgacaaccggctgcggtttatctataacaagcactgtcaactgacacaggttctccac
agtgacgggccggagttgacgctgctttataacctgcgcggacaactgacagagatacgc
cgcaccgatgaaaggttacaggaagtgatggcccgttatcactaccatgacaacggccgg
ctggcggaagcggacagtactcagaacttccacctgtactatgaatataacgcgcagggc
ctgataagccgctggtccgatggcgaccagacctgggtggattaccgttatgataaacag
gggcgctgtactgacagtgtgggagccggcggcttctatccggtccatctggattatgcc
cccggcataacccgctccaccaccccacaggggcacaccaccaccgggcattacaacgac
cagcagttaatcactgaaatccacaccccgtgcggcggcgtgacccgttatgaatacgac
cgctggggcaatctggtcagacagatattaccggaaggggaaaccctgacgctgacttat
ctggccgataccggccgggtcacttcgctgacggaggcgaccggcgcggtatggcaatac
agctatgaggctgacagcctgcaactgaccggcatgaccgacccgctgcaacgcacctgg
ctgccccagtatgatgaacagggccagccggccggatttattgcgccggacggccggaaa
accacgctgacccgcaatgctttcgggctggtgacatccgaaacagacccggacggcaac
agccgcacacaggaatatgataagcatcagcggctggtgcgggtgctggatgaagagaac
cggaccgtcagtctgggttatgacagccaggaccggctgcgcagcctgaccgcggcaggg
gcgctgtggcgctggcgttacgaccgtcatcaccgggtggcggtcagcgaccggccggac
aaccagctggaacacttcacccatgaccgccacgggaacttaacctgctggaccgatgcc
cgcggtgtgaaatggcaggtcgagtatggcccgtttgacctgccggtcgcccggcgtgac
ggcgaggggcatcgctggcagtatcgttatgatgccgacacgctgcaactgacgcaggtg
attaacccgcagggggaaacctacagctacaccctggatgccgacgggcgggttatcacc
gagcaggattatgccggcacgcagtggcattatcgctatgaccggtcggggaactgcatt
gaaaagcgggacggggaagagaacgtgacccgctatgactatgatgctgcccgccggctg
acgacgctgcacaccccggaaggccccacccgttatcattacgacagcgtgggccggctg
ttaaccgtggactccccggacagcaccctgcattttgaatatgacgggcaggaccggata
gtgcgggaaattcagccgcacggagaaattcagcgtcactacccggataaccgcaccgca
gaacggcagttgctgaccggcgaaacagcgccggtcaccggcccggcccggtttagcggt
cagacccaccccggccgctggcagagccggcgggaagttaaccgggtgggagaactgatt
acgctgacgctggcagggcaggcacccctgaccatcgaacgggatgacgccggccgggat
acgggacgttatgtggacgggggatttattctgcgccagcagtacagcctgatgggccag
ttaaccgcgcaacgggccggccgcaatccctattttttccggccggctgaaccggacgag
attgagggacccgcttacgcgggcgtggcccgccggtatgaatacgataccgcgctgaat
ctgaccgccgccagtgatgacgggcagcaggtcaattatctcctcaacggcaacggccag
gtgatttcggtgggggagggccggacactgcgcgagcattatcagtatgatgaaacgggg
tacccgtcaagacggtttgacggggtgcaggagattatgggggaaaccctctatcaggag
ggccatcgcctgaactgggtgggctcgcaccggtttgtttacgaccgggccggccgcatg
caggagaaacagtttttagcggaagggtgccggctggcgctgacgaaataccggtggaac
agccagaatcagctgaccgggcttatcaccccggacgggataccgtgggaatatcgctat
gacgccttcggacggcggacagaaaaacggtgtatccagagcggtaagctgaccacctat
ctgtgggatgggaatgtgccggcggaaatccgcgaatatcagcacggccggctgaaaatg
atccgccatctggtgtttgacggctgggaactggtggcgcagcagacgcaggcgtttacg
cttaatctggataaccgggtggagctgatggccggggaggtgcagacccagtatgcggtc
agcgccccgaccggcgagccgctggcgctgttcgacccggcaggcaaacgggtgtggcga
cgaccgaagcagtccctgtacgggctgcggctgggcggatacggcgaaaacccgcagctg
gacccgggcctgagatttgcggggcaactttttgatgaagaaagtggtttattttataac
cgatttcgctattatttgccggaagcgacgtgctacctcagccctgatccaactggcctc
tggggtggtgagaatacctatcgctatgtgcaaaatcccacgaaatttattgaccctcta
gggcttgctggtgaaaatgtatttattcactatacaaataaagcgggttttgacggcatt
atgaagagcggtgttcttcatccaaacgtcagtggaaaagtttatataacggatgtacta
atgtctccaaaagatgtaatgagagatttattgataaacaaccccaatcatataggacga
ggagactatgcgattattttcaaaatagatccaggggaaagaggaaatatccgctcacct
tctagattagaatatactcatgaaggaaagttgaaattgaataatattctgtatgccggt
aaaaacccatatgccatattagaacatcttgattatgatacgagactcaaactcactgat
aatcaagttaaaatcagaaagtgcggaggaaaataa
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