Photorhabdus laumondii subsp. laumondii DSPV002N: A4R40_02955
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Entry
A4R40_02955 CDS
T05478
Name
(GenBank) DNA helicase UvrD
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
plum
Photorhabdus laumondii subsp. laumondii DSPV002N
Pathway
plum03420
Nucleotide excision repair
plum03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
plum00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
A4R40_02955
03430 Mismatch repair
A4R40_02955
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
plum03400
]
A4R40_02955
Enzymes [BR:
plum01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
A4R40_02955
DNA repair and recombination proteins [BR:
plum03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
A4R40_02955
MMR (mismatch excision repair)
Other MMR factors
A4R40_02955
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Viral_helicase1
UvrD-helicase
AAA_19
UvrD_C_2
Motif
Other DBs
NCBI-ProteinID:
AWK40551
UniProt:
A0A6L9JRX0
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All DBs
Position
complement(677302..678333)
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AA seq
343 aa
AA seq
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MDKRVVFAVAGSGKTSRLVASLDEEKRFLIVTYTESNYSNLRGKIINRFGYFPANITLYT
YFKFLHGFCYRPFLRSDKNTIGITFKLPLAYPRYALTDDRRYVSTNRQVYANRLAKFIEQ
SHLVGAIIARMEKYFDAFFVDEVQDFAGHDFNLLLAISAAELNVSFVGDFFQHTFDTSRD
GNVNASLHKDYTVYEAKFKKAKLLVDTDSLKKSRRCSKSVCDFITEKIGIEIEAYDRRES
VIRYEDNPEAVLALYRDPETVKLFYREHHKYSCHSQNWGASKGVDHYHDVCVVLNPANVR
AWKKGSFRDINAETRNKLYVACSRARGNLTFIPESLLKAYKQS
NT seq
1032 nt
NT seq
+upstream
nt +downstream
nt
atggataagagagtagtatttgccgttgccggatcgggtaagacatcccgtcttgttgcc
agccttgatgaggagaagcgctttcttatcgttacttatacagagtctaactacagcaat
ttgcgtggaaaaattataaatcgattcggttactttccagcaaatattactctctacacg
tatttcaaatttttacacggtttttgctaccggccatttctacgatcggataagaatacc
ataggtatcacattcaaacttcccttggcatacccacggtatgcattgactgacgaccgg
cgttacgtgtcaaccaatcgtcaggtttacgccaaccgtcttgccaaattcatcgagcaa
tctcatctggttggtgcgatcatagcgcgtatggagaagtattttgatgctttcttcgtg
gatgaggttcaggactttgctgggcatgattttaaccttctgctagccataagtgccgct
gagttaaatgtctcctttgttggcgattttttccaacacacattcgacacaagccgagat
ggtaatgtgaacgctagtcttcacaaagattacacggtctacgaggctaaatttaaaaag
gctaaattgctcgtcgataccgacagtctcaaaaagagccgcagatgtagcaaaagtgtt
tgcgattttattacggaaaagattggtatcgaaatcgaagcttatgatcgccgggaaagt
gtcattagatacgaggataacccggaagctgtacttgctctctaccgggatccggaaacg
gtgaagctgttttacagggaacaccacaagtattcctgccactcccaaaattggggagca
tcgaagggagtagaccactatcatgatgtatgtgtagtccttaatcccgctaatgtaaga
gcttggaaaaagggaagttttcgggatatcaatgcggagacacgcaataaactatatgtg
gcctgctcaagggcaagaggcaatctgacgtttattccggaatctttgctcaaagcttac
aagcaatcttga
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