Photorhabdus laumondii subsp. laumondii DSPV002N: A4R40_03040
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Entry
A4R40_03040 CDS
T05478
Name
(GenBank) RNA polymerase-binding ATPase
KO
K03580
ATP-dependent helicase HepA [EC:5.6.2.-]
Organism
plum
Photorhabdus laumondii subsp. laumondii DSPV002N
Brite
KEGG Orthology (KO) [BR:
plum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
plum03021
]
A4R40_03040
Transcription machinery [BR:
plum03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
A4R40_03040
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RapA_C
Tudor_RapA
Tudor_1_RapA
Helicase_C
SNF2-rel_dom
ResIII
DEAD
AAA_34
Cas3-like_C_2
Flavi_DEAD
BCDHK_Adom3
Motif
Other DBs
NCBI-ProteinID:
AWK40567
LinkDB
All DBs
Position
complement(698756..701668)
Genome browser
AA seq
970 aa
AA seq
DB search
MPFTLGQRWISDTESELGLGTVVALDARMVTLLFPASGENRLYARNDSPITRVMFNSGDV
VTSHEGWQLKVDEIQQENGLLIYTGTRLDTLEENISLREVFLDSKLTFNKPQDRLFAGQI
DRMDRFALRFRARKYQSEQFKLAESGLRGIRASLIPHQLHIANEVGKRYAPRVLLADEVG
LGKTIEAGMIIHQQLLAGRAERVLVIVPDSLQHQWLVEMLRRFNLRFALFDDSRYIEARH
DSDNPFETEQLVLCSLDFARRNKQRFEHMLEASWDLMVVDEAHHLVWSEDAPSREYQVVE
QLAEQIPSVLLLTATPEQLGQESHFARLRLLDPNRFHDYQTFIDEQQKYRPVADAVTLLL
SGEQLNNNQLNLMGELISEQNIEPLLKAANSNSGESETARRELISMLMDRHGTSRILFRN
TRNGVKGFPHRELHQIKLPLPSQYQTAIKVSDIMGAKKSLEARAWDMLYPEQIYQEFEGE
NATWWNFDPRVEWLLGFLMANRHEKVLVICAKATTALQLEQVLREREGIRGAVFHEGLSL
IERDRAAAYFASEEEGAQVLLCSEIGSEGRNFQFANQLVMFDLPFNPDLLEQRIGRLDRI
GQSRDIQISVPYLENTAQAVLIRWYHEGLDAFEHTCPTGRTIYDHYYETLLNYLAKPNNQ
DQEKFGEFIDQCRQQHEQLKQQLEQGRDRLLEMNSNGGEHGLRLAEKISEYDNDTDLVNF
SLNLFDIVGINQEDRNDNMIVLTPSDHMLVPDFPGLPKDGCTITFDREQSLSREDAQFIS
WEHPIIRNGLDLILSGDTGSCAVSLLKNKALPVGTLLVELIYVVEAQAPKRLQLTRFLPP
TPLRILMDLKGNNLADQVEFESFNRQLNAVNRHTASKLVNAVQKEVHAILQQAEGLVETQ
AKSLIEQAEQEADENLAAELSRLEALKTVNPNIRDDELEAIEANRQQLLLNLNQASWRLD
AIRLVVVTHQ
NT seq
2913 nt
NT seq
+upstream
nt +downstream
nt
atgccatttaccctcggtcaacgctggatcagcgatacagaaagcgaacttggattagga
accgttgttgcactggacgcacgaatggtcactttgctctttcctgccagcggtgaaaac
cgcctctatgcacgcaatgattctcctattacccgtgttatgtttaactcgggagatgtt
gtcaccagccatgaaggctggcaactcaaagtagatgaaatccaacaagaaaatggcctg
ctgatttatacgggcacacgacttgatactctggaagaaaatatcagtctgcgcgaagtg
ttccttgacagtaaacttaccttcaacaaaccacaggatcgcctgtttgctggtcagatt
gaccgtatggaccgctttgccttacgttttcgcgcccgtaaataccaaagcgaacaattt
aaactggctgaaagtggtttgcggggtatccgcgcaagcttgatccctcatcaacttcac
atcgcaaatgaagtcggcaagcgctacgcaccaagagttctgttggccgatgaagtcggt
ttgggtaaaaccatcgaagccgggatgatcatccaccagcaattgctggccggtcgtgct
gaacgtgttctggtgattgtgccggatagtcttcaacatcaatggttggtagaaatgctg
cgccgtttcaatttgcgctttgccctgtttgacgatagccgctatatcgaagcacggcac
gatagcgataatccatttgaaacagaacaattggtactctgttcactggattttgcccgc
cgtaataaacagcgttttgagcatatgcttgaagccagctgggatttgatggtggtggac
gaagctcaccatctggtctggagcgaggatgcacctagccgtgaatatcaggttgtcgaa
caattagctgaacagatcccaagtgtgctgctattgactgcaacaccagagcagctagga
caggaaagtcattttgcccgtctacgcctacttgacccaaaccgtttccacgattatcag
acttttattgacgaacaacaaaaatatcgtccagttgccgatgctgtcacactgctgtta
tcaggtgaacaacttaataataatcaattaaacctaatgggtgagttgattagtgagcag
aatattgagcctctgctgaaagctgccaatagtaatagtggtgaaagtgaaactgcacgg
cgtgaactgatttccatgctgatggatcgccacggcaccagtcgtattctgttccgtaat
acccgtaatggtgtgaaaggcttcccccatcgggaattgcaccagataaagttgcctctg
ccatcccaatatcagaccgccattaaagtctccgatattatgggcgctaaaaaatcgctg
gaagcacgcgcatgggatatgctctatccagaacaaatttatcaagagtttgaaggcgaa
aacgctacctggtggaactttgatcctcgcgtagaatggctactcggttttctgatggca
aatcgccatgaaaaagtgctggtaatttgtgcgaaagcaaccaccgctctgcaattggaa
caggtactacgtgagcgagaagggattcgtggtgctgttttccatgaaggtctatcactg
attgaacgtgatcgcgccgcagcctattttgcttccgaagaagaaggagctcaggtatta
ctatgctccgaaattggctcagaaggccgcaacttccagttcgccaaccaattagtgatg
ttcgatttaccattcaatccagatttactggaacagcgtatcggacgtctggatcgtatc
ggccaaagccgtgatatccaaattagtgtgccttatctggagaacaccgcccaagcagtc
ctgattcgttggtatcacgaaggtttggatgcattcgagcatacctgcccaaccggtcgt
actatttacgatcactattatgaaactctgctgaactatcttgccaaacccaataatcag
gaccaagaaaaatttggtgaatttattgatcagtgccgtcagcaacatgagcaactcaaa
cagcaactggagcaaggccgtgaccggctgctggaaatgaactccaatggcggcgagcat
ggtttgcgactggcagaaaaaatttcagagtatgataatgatactgatttggtgaacttc
tctctcaacttatttgatatcgttggtatcaatcaggaagatcgcaatgacaatatgata
gtgctgacaccatccgatcatatgctggtcccagatttccctggattaccaaaagatggt
tgtactatcacttttgatcgtgaacagtcactgtcccgtgaagatgcccagtttatcagt
tgggagcacccaattatccgtaatgggttagatctgatcctttccggtgatacgggtagc
tgtgcagtatcccttttgaaaaataaagcattacctgttggaaccctgctggtagagctg
atctatgtcgttgaagcacaagcccctaaacgcctgcaattgacccgcttccttccacca
acgccattgcggatactgatggacctgaaaggcaataatctagctgatcaagtggagttt
gaaagctttaaccgccagcttaatgcagtgaatcgtcatactgcaagtaaactggtcaat
gcggtacaaaaggaagttcacgctattttgcaacaagccgaaggtttagtcgaaactcag
gcaaaatcattgattgaacaagcagaacaggaagcagatgaaaatcttgctgctgaactt
tcccgtttggaagcattgaagacggtcaatccaaatattcgtgatgatgaattggaagcc
attgaagccaatcgccaacagttactgcttaacttaaatcaggcaagttggcgtctggat
gctattcgccttgttgtcgttacacatcagtaa
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