Photorhabdus laumondii subsp. laumondii DSPV002N: A4R40_03405
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Entry
A4R40_03405 CDS
T05478
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
plum
Photorhabdus laumondii subsp. laumondii DSPV002N
Pathway
plum03030
DNA replication
plum03430
Mismatch repair
plum03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
plum00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
A4R40_03405 (dnaE)
03430 Mismatch repair
A4R40_03405 (dnaE)
03440 Homologous recombination
A4R40_03405 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
plum03032
]
A4R40_03405 (dnaE)
03400 DNA repair and recombination proteins [BR:
plum03400
]
A4R40_03405 (dnaE)
Enzymes [BR:
plum01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
A4R40_03405 (dnaE)
DNA replication proteins [BR:
plum03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
A4R40_03405 (dnaE)
DNA repair and recombination proteins [BR:
plum03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
A4R40_03405 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
DNA_pol_IIIA_C
HHH_6
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
AWK40634
UniProt:
A0A6L9JNQ4
LinkDB
All DBs
Position
787634..791116
Genome browser
AA seq
1160 aa
AA seq
DB search
MAEPRFVHLRVHSDYSMIDGLAKTSPLVKKVAQLGMPAFAITDFTNLCGLVRFYGSAHGA
GIKPIIGADFYVESELLGDEHASLTILARNNTGYHNLTLLISEAYQKGYGAIGPTIKQEW
LINHKEGLILLSGGRMGDVGKFLLRGNQAMVDQCLEFYQEHFPGCYYLELIRTGRADEES
YLHAAVALATEKSLPVVATNDVCFIDGEDFDAHEIRVAIHDGYTLADPKRPKNYSPQQYL
RSEQEMCELFADIPEALENSVEIAKRCNVTIRLGEYFLPQFPTGEMSTEDYLINRSQQGL
EERLAFLYPDPKVRAEKRPEYDERLDIELRVINQMGFPGYFLIVMEFIQWSKDNGVPVGP
GRGSGAGSLVAYALKITDLDPLEFDLLFERFLNPERVSMPDFDVDFCMEKRDLVIDHVAD
MYGRNAVSQIITFGTMAAKAVIRDVGRVLGHPYGFVDRISKLIPLDPGMTLEKAFAAEPQ
LPEIYEADEEVKALIDMARKLEGVTRNAGKHAGGVVIAPTKITDFSPLYCDPEGLNPVTQ
FDKNDVEYAGLVKFDFLGLRTLTIINWALEMINARRTKKGLEPIDIAAIPLNDAKSFDML
QRAETTAVFQLESRGMKDLIKRLRPDCFEDMIALVALFRPGPLQSGMVDNFIDRKHGREE
LSYPDIQWQHESLQPVLEPTYGIILYQEQVMQIAQVLAGYTLGGADMLRRAMGKKKPEEM
AKQRSVFEDGAKKLGINGELAMKIFDLVEKFAGYGFNKSHSAAYALVSYQTLWLKAHYPA
EFMAAVMTADMDNTEKVVGLIDECWRMGLKILPPDINSGLYHFHVNDDGEIVYGIGAIKG
VGEGPIEAIIEARQKDGYFRELFDLCARVDTKKLNRRVMEKLIMSGAFDRLGPHRAALMS
SLEDALKAADQHAKAEATGQTDMFGVLAEAPEEVERSYANISQWPEQIVLDGERETLGLY
LTGHPITRYLKEIERYTSGLRLKDVNPTPRGQVTTVIGLVLASKVIITKRGNRIGICTLD
DRSGRLEVMLFSDALEKYRHLLEQDRILIATGQVSFDDFNGGLKMTARELMDISEAREKY
ARGLAISLSDRQIDDQLLSRLRSALEPHRSGTIPVHLYYQREDARARLRFGATWRVTPTD
NLLTDLRTLLGNEQVELEFD
NT seq
3483 nt
NT seq
+upstream
nt +downstream
nt
atggccgaaccccgttttgtgcacttacgtgttcacagcgactattcaatgattgatggc
ttagccaaaaccagccctttagtgaaaaaggttgcgcaattaggtatgccggcttttgcg
atcactgattttactaatttgtgtgggctggtgagattttacggcagtgctcatggagca
ggaataaaaccgattattggtgctgatttttatgtagaaagtgaactgcttggtgatgag
cacgctagcttgaccattcttgcgcgcaataatacgggttaccataacctgacattgctg
atatcagaggcttatcagaagggatatggtgcgattggtccgacaattaaacaggaatgg
ctgataaaccataaagaagggctaattctgctctccggtggtcgtatgggggatgtgggt
aagttcttgttgcgtggtaatcaggctatggtggaccaatgccttgagttttatcaggaa
cattttcccggctgttattatttggagctgatccgtactggccgtgcagatgaagaaagt
tatcttcatgcggcggtggcattggcaacggaaaaaagcctgcctgttgttgcaactaat
gacgtttgtttcattgatggcgaagatttcgatgctcatgagattcgcgtagcgattcat
gatggctataccttggctgatcctaaacgtccgaaaaattacagccctcagcaatatctg
cgtagtgagcaggaaatgtgtgagctattcgctgatattcctgaagcgctggaaaacagt
gtagaaattgctaagcgctgtaatgtcactattcgccttggtgaatatttcctgccgcaa
ttccctacgggagaaatgagtaccgaagattatctgataaatagatctcaacaagggttg
gaagaacgtttagcatttctctacccggatcctaaagtacgcgcagaaaaacgtcctgaa
tatgatgagagactcgatattgaacttcgggttatcaaccaaatgggattcccgggctac
ttcctgatcgtgatggaattcattcagtggtcgaaagacaacggtgttcctgttggtccg
ggacgtggttcgggagcaggttctctggtggcttatgccctaaaaataaccgatctcgat
cctttggaatttgatctgctctttgaacgattccttaaccctgaacgtgtttccatgccc
gattttgacgtcgatttttgtatggaaaaacgcgatctagtgattgatcatgtggctgat
atgtatggtcgtaatgccgtatctcagatcattacattcggtacaatggcagcgaaagca
gtaattcgggatgttggccgcgtgctagggcatccatacggatttgttgataggatttcc
aaattgataccgcttgatcccggtatgacgttggagaaagcatttgccgctgagccacaa
cttcctgaaatctatgaagcggatgaggaagttaaagcactgatagatatggcgcgtaaa
ttggaaggtgtcactcgtaatgcagggaaacatgcgggtggggtggttatcgccccaacg
aagatcaccgatttttcgcctctctattgtgacccggaaggtttgaacccggttactcag
tttgataaaaatgatgtggaatatgcagggttggtgaaatttgacttcctcgggctgaga
acactgaccattatcaactgggcattggagatgatcaacgcgcgtagaacgaagaaaggt
ctagagccgattgatattgcagcgattccgctgaacgatgctaaaagctttgatatgttg
caacgcgctgaaacaacagcagtatttcagctggaatcccgtggtatgaaggatctgatt
aaacgtctgcgtcccgattgcttcgaagatatgatcgcgcttgtcgctttattccgtcca
ggtcccttgcagtcaggcatggtggataacttcattgaccgcaaacatggccgggaagag
ctctcatacccagatatacagtggcagcacgaatctctacagcctgtgttggagccaact
tacggcatcatcctttatcaagaacaagtgatgcagattgctcaggtgctggcgggatat
actctcggtggtgcagatatgctccgacgggcgatgggtaagaaaaagccggaggagatg
gctaagcagcgttctgtttttgaagacggtgcaaagaaactgggtattaatggcgaactg
gcaatgaaaatctttgacctggtagagaagtttgccggttatggatttaataaatctcac
tctgctgcgtatgccttggtttcttatcagactttatggctgaaagcgcattacccggct
gaattcatggctgcggtaatgactgcggatatggataatacagaaaaagtcgttgggttg
attgatgaatgctggcgcatggggctgaaaatcttaccacctgatattaatagtggtttg
tatcatttccacgttaatgatgatggggagatcgtatatggaatcggcgcaattaaaggg
gtaggtgaagggccgattgaagcgatcatcgaagctcgtcagaaagatggttattttaga
gaactgtttgatttatgtgcccgtgttgacaccaagaagttaaatcgccgagtgatggaa
aaactgatcatgtcaggggcatttgaccgtttagggccgcaccgtgcagcactgatgtct
tcgttggaagatgcgctaaaagcggcagatcaacatgctaaagcagaagctactggtcag
actgatatgtttggtgtattagctgaagcgccagaagaagtggaacgctcttatgccaat
atttctcaatggccggaacagattgttcttgatggtgaacgggaaacgctaggtctctat
ttaactgggcatcctatcacccgttatttaaaagaaattgagcgttatactagtggattg
cggttaaaagatgtgaatccaaccccacgcggtcaagtaacaactgtgataggtttggtg
ctggcatccaaagtgattataaccaaacgaggtaaccggattggtatttgtactttagat
gatcgttcaggacgtctagaagttatgttattttccgatgccttggagaaatatcggcat
ttgctagaacaagaccggatattaatcgctacaggtcaggtcagctttgatgatttcaat
ggcggtcttaaaatgacagcccgtgaattaatggatattagtgaagcgcgtgaaaaatat
gcgcgtgggcttgctatctcgctgtcagacaggcaaattgatgatcaattgttgagccgt
cttcgtagtgcattggaaccacatcgttcgggaacgataccggttcatctttattaccag
agggaagacgcccgcgcccgtttaagatttggcgcgacgtggagggtaacgccaacggat
aaccttctgacagatttgcgaactctgctgggtaatgagcaggtagaattagaatttgac
taa
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