Photorhabdus laumondii subsp. laumondii DSPV002N: A4R40_04690
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Entry
A4R40_04690 CDS
T05478
Name
(GenBank) lytic transglycosylase
KO
K08307
peptidoglycan lytic transglycosylase D [EC:
4.2.2.29
]
Organism
plum
Photorhabdus laumondii subsp. laumondii DSPV002N
Brite
KEGG Orthology (KO) [BR:
plum00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
plum01011
]
A4R40_04690
Enzymes [BR:
plum01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
A4R40_04690
Peptidoglycan biosynthesis and degradation proteins [BR:
plum01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
A4R40_04690
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GFIT
Motif
Pfam:
SLT
LysM
LysM_RLK
LysM3_LYK4_5
NMB0315_dom_I
HTH_23
LysM1_NFP_LYK
LPAM_MltD
DUF16
HTH_Tnp_1
Motif
Other DBs
NCBI-ProteinID:
AWK40865
UniProt:
A0A6L9JFW7
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Position
complement(1081243..1082604)
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AA seq
453 aa
AA seq
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MKTKAILFASVLLVGCQSGPDWSTTAGQRAQNSSSTSLKTGKIATDNTNQLAAYWGEGDS
GAQHELWGYIRDELKMKIPDNYRVREQRNYYLKNKSYLHDVTLRAEPYMYWIVRQIKQRD
MPMELVLVPIVESAFNPHATSHAKAAGLWQIIPDTGRNYGLTQDKWYDARRDVAASTTAA
LNLLQRLNKMFNGDWLLAIAAYNSGEGRVMRAIKENQIKGKPTDFWSLSLPRETALYVPK
VLALSDVIRNSDKYGITLPKSNNQRALAQIDVGQQITLSQAAELAGMSLTSIKAYNPGYK
RGVTSPNGPHYIMLPKAKVNQFKNSLANKTVLSNIRQEVAKNNHRLSKQSQYKVRSGDTL
SAIAKRFNISTRELQRLNNLKTARLLKIGQLLRVNNDNAIIYRVRQGDSIASIAKRHGIN
IKDLMNWNDGIKTTDIKPGIELTLYINEYYDEA
NT seq
1362 nt
NT seq
+upstream
nt +downstream
nt
atgaagacaaaagcgattctgttcgcatctgtcttgctggttggctgtcaatcagggcct
gattggtcgacgacagccggacaacgggcacagaattcgtcttcaacgagtctaaagacc
ggcaagatagcaactgataataccaatcagcttgctgcttactggggagagggtgattct
ggcgctcagcatgagctgtggggatatatccgtgatgagttgaagatgaaaatccctgat
aactacagggtacgtgaacaacgaaattattacctgaaaaacaagagctatctccacgat
gtaactttacgggctgaaccgtatatgtactggatagtcaggcagataaagcaacgcgat
atgccgatggaactggtactggtacccatagtggagagtgcttttaacccgcatgctacc
tcacatgctaaggccgctggtctgtggcagattatcccggatacgggtcgcaattacggt
cttactcaagataaatggtacgacgcacgtcgggatgttgccgcatcaaccactgccgcc
ctgaatctgttacaacgcctgaataaaatgttcaatggtgactggttattggctattgct
gcttataacagcggcgaaggccgtgttatgcgcgcaataaaagaaaaccagataaaaggt
aagccaacggatttctggtcattatcactaccacgggagactgcgctctatgtgcctaaa
gttctggcgctcagtgatgtcatccgtaatagcgataaatatggcattacgctgccaaaa
tccaataaccagcgggcacttgctcaaattgatgttggtcaacaaatcacgctgtctcaa
gccgcagaactggctggtatgtccctgacatcgattaaagcctacaaccctgggtataag
cgaggagtgacatcacctaacggcccgcattacatcatgctgccaaaggcaaaagttaat
cagtttaaaaactcgctggcaaataaaacagttttgagcaatattcgccaagaagttgct
aaaaacaaccaccgactgagtaaacaaagccaatataaagttcgttcaggtgatacatta
tccgctattgccaagcggtttaatatttccacccgtgaattacagcgcttgaataatctg
aaaaccgccagattgttaaaaatcggacaattattaagggtaaataatgacaatgctatt
atttaccgtgtacgccaaggtgattcaattgccagtatagctaaacgtcatggcatcaat
attaaggatttaatgaactggaacgatggtataaaaacaacagatatcaagccaggaatt
gaactaacgctttatatcaatgaatattatgatgaagcataa
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