Photorhabdus laumondii subsp. laumondii DSPV002N: A4R40_10590
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Entry
A4R40_10590 CDS
T05478
Symbol
ruvB
Name
(GenBank) Holliday junction DNA helicase RuvB
KO
K03551
holliday junction DNA helicase RuvB [EC:
5.6.2.4
]
Organism
plum
Photorhabdus laumondii subsp. laumondii DSPV002N
Pathway
plum03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
plum00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
A4R40_10590 (ruvB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
plum03400
]
A4R40_10590 (ruvB)
Enzymes [BR:
plum01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
A4R40_10590 (ruvB)
DNA repair and recombination proteins [BR:
plum03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
A4R40_10590 (ruvB)
RecFOR pathway proteins
A4R40_10590 (ruvB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvB_N
AAA_lid_4
RuvB_C
AAA
AAA_5
AAA_22
AAA_3
AAA_16
nSTAND3
AAA_14
Mg_chelatase
Rad17
AAA_2
RNA_helicase
TIP49
AAA_18
AAA_17
NTPase_1
Bac_DnaA
AAA_28
AAA_24
NB-ARC
ABC_tran
bpMoxR
TsaE
NPHP3_N
Motif
Other DBs
NCBI-ProteinID:
AWK41902
UniProt:
A0A6L9JL63
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All DBs
Position
2494994..2496001
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AA seq
335 aa
AA seq
DB search
MIEADRLVSAEVLQDDEAIDRAIRPKLLSEYVGQPQVCEQMEIFIQAARQRGDALDHLLI
FGPPGLGKTTLANIVANEMGVNLRTTSGPVLEKAGDLAAMLTNLEPHDVLFIDEIHRLSP
VVEEILYPAMEDYQLDIMIGEGPAARSIKIDLPPFTLIGATTRAGSLTSPLRDRFGIVQR
LEFYNVDDLQSIVSRSARFMGVEITDDGARQVAMRSRGTPRITNRLLRRVRDFAQVKGNG
AIDGNIATRALDMLSVDAAGFDYLDRKLLIAIIDKFMGGPVGVDNLAAAIGEERETIEDV
LEPFLIQQGFIQRTSRGRIATEHAYRHFGMVRNQE
NT seq
1008 nt
NT seq
+upstream
nt +downstream
nt
atgattgaagctgaccgtctggtttctgcggaagttttgcaagacgatgaagcgattgac
cgcgcaatcagacctaaattgttgtctgaatatgttgggcaaccgcaagtctgtgagcag
atggagatttttattcaggctgccagacagcgtggtgatgcccttgatcacctgctgatt
tttggtccgccgggattggggaaaacaacgctggcgaatattgttgccaatgagatgggc
gttaatcttcgcacaacttctggtccggtgttggaaaaggcgggcgatctggcggcaatg
ctgaccaatcttgagccgcatgatgtgttgtttatcgatgaaattcaccgtttatcgccg
gtagtggaagaaattctctatccagcaatggaagattaccaactggatattatgattggc
gaggggccggcagcccgttcgatcaaaattgatttgccgccttttaccctgattggggct
accactcgcgcaggttctttgacttcgccactgcgtgatcggttcggtatcgtgcagcgc
cttgaattttataatgtggacgatttgcaaagtatcgtttctcgcagtgcccgttttatg
ggagtagagattactgacgatggtgcccggcaggttgctatgcgttctcgtggaacgccg
cggattacaaaccgtttactgcgccgggtacgtgattttgctcaagtaaaagggaatggt
gcgattgatggcaatattgccaccagagcgctggatatgttgagcgtagatgctgccggt
tttgattatctggatcgtaagttactgattgccatcattgataaatttatgggcgggccg
gttggggtagataaccttgccgctgctattggtgaagagcgggaaacgattgaggatgtg
ctggaaccctttttgattcaacagggctttattcaacgtacttcccgtggacgaattgcc
actgaacatgcttatcgccattttggcatggtcagaaatcaggaatga
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