Photorhabdus laumondii subsp. laumondii DSPV002N: A4R40_10705
Help
Entry
A4R40_10705 CDS
T05478
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
plum
Photorhabdus laumondii subsp. laumondii DSPV002N
Brite
KEGG Orthology (KO) [BR:
plum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
plum03016
]
A4R40_10705
Enzymes [BR:
plum01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
A4R40_10705
Transfer RNA biogenesis [BR:
plum03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
A4R40_10705
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
RNAseD_HRDC_C
HRDC
Motif
Other DBs
NCBI-ProteinID:
AWK41924
UniProt:
A0A6L9JI06
LinkDB
All DBs
Position
2519650..2520777
Genome browser
AA seq
375 aa
AA seq
DB search
MNYQLITTDAQLQQVCEGAKKYSKVALDTEFVRTRTYYPQLGLIQLYDGEQLSLIDPLNI
TNWQPFRELITHPQILKLLHAGSEDLEVFLNAFQCLPEPMIDTQVLAAFIGHPLSCGFAA
LVAEYIHVELDKSESRTDWLARPLSEKQCEYAAADVYYLLPLADILMTATAQAGYMEAAT
GECRLISRRRKEILEPESAYKQIGNICQLRPQQLACLKKLAAWRLSQARERDLAVNFVIR
EENLWQVARYMPTSLAELDALGLSGQEIRCHGRRLLAMVAESGNIPESECPPPMTNLIDQ
PGYRKAFKDIKALIHQVSEQHRFNSELLASRRQINQLLSVHWNLKQLNDKPELLSGWRGE
LLAEPVAEILANYPD
NT seq
1128 nt
NT seq
+upstream
nt +downstream
nt
ttgaattatcagttgatcaccacagatgctcagttgcaacaagtttgcgaaggggcaaaa
aaatactcaaaagtagcattggatactgaatttgtacgcacacggacgtattacccgcaa
ttaggtttgatacaactgtatgatggcgaacaactttctctgattgatccacttaatatc
accaactggcaacctttccgtgagttaattactcatcctcaaatattgaagctgttacat
gctggcagtgaagatttggaagtttttctgaatgcttttcaatgcttgccagaaccgatg
attgatactcaggtcctggcggcttttattgggcacccgctttcatgtggctttgccgcg
ctggtggctgaatatattcatgtcgagctggataaaagtgaatcccgcactgattggctt
gctcgcccgttaagtgaaaaacagtgtgaatatgcagccgcagatgtttattatctgttg
cctttggcggatatcttgatgactgcaacagcgcaggccggatatatggaggctgcgacg
ggtgagtgtcggcttatcagtcgacgccgtaaagagatattggaaccggaatctgcttat
aaacagataggcaatatttgtcaattacgtccccaacagcttgcgtgtttgaaaaaactg
gctgcatggcgtttgagtcaggccagagaacgcgatttagccgtaaacttcgtcattcgt
gaagaaaacttgtggcaggtagcgcgttatatgccaacttctctggcagagttggatgcg
ttagggttaagcgggcaggagattcgttgtcatggtcgccgtctattggcaatggttgct
gaaagtggaaatattccagaaagtgaatgcccgccgccaatgacgaacttgattgatcaa
ccgggttatcgcaaagcatttaaggatattaaggcgctgatccatcaagtcagtgaacag
catagatttaattctgaattattggcatctcgtcgtcagattaatcaattacttagtgtt
cactggaacttgaaacaattaaatgacaaacctgaactgcttagtggatggcggggagaa
ttgctggctgagccagttgcagagattctggcgaactatcctgattaa
DBGET
integrated database retrieval system
