KEGG   Photorhabdus laumondii subsp. laumondii DSPV002N: A4R40_11455
Entry
A4R40_11455       CDS       T05478                                 
Name
(GenBank) ClpV1 family T6SS ATPase
  KO
K11907  type VI secretion system protein VasG
Organism
plum  Photorhabdus laumondii subsp. laumondii DSPV002N
Pathway
plum03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:plum00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    A4R40_11455
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:plum02044]
    A4R40_11455
Secretion system [BR:plum02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   A4R40_11455
SSDB
Motif
Pfam: AAA_2 AAA_lid_9 AAA AAA_5 ClpB_D2-small AAA_16 Clp_N AAA_22 ATPase_2 AAA_7 nSTAND3 NBD_SMAX1 Sigma54_activat nSTAND6 AAA_25 IstB_IS21 AAA_14 NACHT TIP49 TniB AAA_29 TsaE Zeta_toxin DUF815 AAA_30 SLFN-g3_helicase Hpr_kinase_C DUF6852 DUF7146 SopD AAA_6
Other DBs
NCBI-ProteinID: AWK42059
LinkDB
Position
complement(2684730..2687312)
AA seq 860 aa
MSNYLKQIVSKLTVEARQCLDEAVNLAVRRTHHEVEIEHLLLALFEKQLPTMEQVCHHGG
IDSMTLLNACQRSLALLRSGNHRPPVLATSLTEWMEQTWMYASTHWGASQITAQVLIVAL
IMNPSLHHSLTSELQQALQGNTDGIEPWLRTQTNTTPQHITAPVGDNTQSALAQYTHHLT
QAARDNKLDPVLGREREIRQLIDVLLRRRQNNPLLTGEAGVGKTALIEGLAQRIVDGRVP
KVLAQAELFTLDMGLLQAGASVKGEFESRLQKLLDEVKKYPTPVILFIDEAHTLIGAGGQ
AGQNDAANLLKPALARGELRAIAATTWSEYKKYFEKDAALARRFQLIKVEEPSLELAIAM
LRAITPAMEKHHNVKVLAEAVTEAVTLANRYITGRQLPDKSVSLLDSACARVAVSQTDEP
APIEDLRAMLANIAAEQEALLREGGHETQLQKLAQHQAKLQASLAEILPEYHAQRQLVND
ILACDEHDERLPVLRAELHQRHHQHAYVFDCVDAACVADIVAGWTGIPLGRMVENERDVL
RQLETRLGQRVMGQDHALSQIARQIRIAKVQLADPIKPTGVFMLAGPSGVGKTETALALA
HELYGGEHHLITINMSEYQEAHSVSGLKGSPPGYVGYGQGGVLTEAVRRQPYSVVLLDEV
EKAHPDVLELFFQVFDKGMMEDAEGQQINFRNTLIILTTNAASDLVMRAAMHGVKEQGEN
RPATLEDIQEIIRPELQRIFTPAFLGRLQVIPYLPVQGEVLHAIVHHKLNKIVTRYRQST
QCELHYSDTLVDFIAKGCQIAESGAREIDNLLTQFVLPLLSDQLLLGGVPVNQDVWMDVI
DGQIQLRSDQKKLSLSNIIN
NT seq 2583 nt   +upstreamnt  +downstreamnt
gtgagtaattatcttaaacagatcgtcagtaaattaacggtagaagcgcgtcagtgcctt
gacgaggcggttaatctggcagtacggcgcacccatcatgaagtggaaattgaacatttg
ctgttggctttgtttgaaaaacagcttccgacgatggagcaagtgtgtcaccacggcggt
attgatagcatgacattgttgaatgcttgccaacggtcactggcattattacgcagcggt
aatcatcgtccgccggtgctggctaccagcttaactgaatggatggaacagacctggatg
tacgccagtactcactggggagcatcacagattaccgctcaagtactgattgtggccctg
atcatgaatccgtcactgcaccattctcttacctcagagctacaacaagcgttacagggt
aacaccgatgggatagaaccgtggttgcgtacacagacaaatacgacaccacaacacatt
acagcacctgttggggataatacccaatccgcactggcacaatacacgcatcacctgaca
caagcagcgcgtgataacaaactcgatccggttttaggacgtgaacgagagattcgtcag
ttgattgatgtgctattacgtcgtcgccaaaacaacccgctgttaaccggtgaagccggt
gtcggcaaaaccgcgctgattgaagggcttgctcagcggatcgtggatggccgtgtaccg
aaagttttggcacaagccgaactatttacgctggatatggggctgttacaagcgggtgcc
agcgtaaaaggtgagtttgaaagccgcttgcaaaaattattggatgaggtgaagaagtat
cccaccccggtgattctgtttatcgatgaagcgcatacgctgattggcgcaggtggccaa
gccggacaaaatgatgcggctaatctgttgaaacccgcgctggcacgtggcgaattacgg
gcaattgcggcaaccacctggtctgaatataagaagtattttgaaaaagacgccgcgtta
gcacgtcgtttccagttgatcaaagtcgaagaaccttcgctagaactggcaatcgccatg
ttgcgggccataacacccgcaatggaaaagcatcataacgtcaaagtacttgcagaggca
gtcacggaagcggttacgttagccaaccgttatatcactggacgtcagttaccggataaa
tcagttagcctgttagatagcgcctgtgcccgcgttgccgtttcacagaccgatgaaccg
gcaccgattgaagatctgcgagccatgttggcaaacattgctgccgaacaggaagccctg
ttacgtgaaggcggccatgaaactcagttacagaaattggcgcagcatcaggctaaattg
caggcatcactggcagaaattttgccggaatatcacgctcaacgtcagttggtcaatgac
atcctcgcctgtgacgaacacgacgaacggctaccagtgttacgtgcagaactgcatcag
cgccaccatcagcacgcttatgtctttgactgtgttgatgccgcctgtgtagcggacatt
gttgctggttggacagggataccccttggtcgaatggtcgaaaatgagcgtgatgtgttg
cgtcagttggaaacccgtctcggccaacgggttatggggcaagatcatgcgctcagccag
atagcacgtcaaattcggattgctaaagtacaacttgccgatccgatcaaacctaccgga
gtatttatgctcgcagggccttccggtgtaggaaaaaccgagaccgccttagcgctggct
catgagttgtatggtggtgaacatcatctgatcacaattaacatgtcggaatatcaggaa
gctcattcggtttccggcctgaaaggttctcctccaggctacgtcggttatggacaaggt
ggtgtattgaccgaagcagttcgacgtcaaccttacagcgtcgtgctacttgatgaagtg
gagaaagctcaccccgatgtgctggaactgttctttcaggtgttcgataaaggcatgatg
gaagatgccgaagggcaacagattaactttcgcaatacgctaattatcctgaccacaaat
gcggcatcagatttggtaatgcgggccgccatgcacggcgtaaaagagcagggggaaaat
cgcccggccaccctggaagatattcaggagattatccgaccagagctacaacgtattttt
acgccagcatttttaggtcgtttgcaggttattccttatctgccggtacagggcgaagtt
ctgcatgccattgtgcaccataaactgaataaaattgtcacacgttatcgtcaatcaacc
caatgtgaattgcactatagcgacacgctggtggattttatcgctaaaggatgccagatc
gcggaaagcggtgctcgtgaaattgataatctgttaacccagtttgtcctgccgttgtta
tcagatcaattgctattaggtggcgtgccagtcaatcaggatgtctggatggatgttata
gacggtcaaatacagctacgatcagaccaaaagaaactatcactatctaatattatcaac
taa

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