Photorhabdus laumondii subsp. laumondii DSPV002N: A4R40_13770
Help
Entry
A4R40_13770 CDS
T05478
Name
(GenBank) RNA degradosome polyphosphate kinase
KO
K00937
polyphosphate kinase [EC:
2.7.4.1
]
Organism
plum
Photorhabdus laumondii subsp. laumondii DSPV002N
Pathway
plum00190
Oxidative phosphorylation
plum03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
plum00001
]
09100 Metabolism
09102 Energy metabolism
00190 Oxidative phosphorylation
A4R40_13770
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
A4R40_13770
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
plum03019
]
A4R40_13770
Enzymes [BR:
plum01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.4 Phosphotransferases with a phosphate group as acceptor
2.7.4.1 ATP-polyphosphate phosphotransferase
A4R40_13770
Messenger RNA biogenesis [BR:
plum03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
A4R40_13770
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PP_kinase_C_1
PP_kinase_C
PP_kinase
PP_kinase_N
PLDc_2
RE_NgoFVII
Frataxin_Cyay
Motif
Other DBs
NCBI-ProteinID:
AWK42485
UniProt:
A0A6L9JMA5
LinkDB
All DBs
Position
3272999..3275068
Genome browser
AA seq
689 aa
AA seq
DB search
MSQDRLYTDKELSWLSFNERVLQEAADKSNPLIERMRFLGIYSNNLDEFYKVRFADVKRR
ILINEERGSATSARNVLKKIQAKVAKTDQEFDVLYNELLLEIARNQIFLINERQISPNQQ
IWLRQYFRQHLRPHITPILINPETNLVEFLKDDYTYLAVEIVHSQNIQYALLEIPSDKVP
RFVNLPPEMPHRRKSMILLDNIMRYCLDEIFKGFFDYDSLNAYSMKMTRDSEYDLATEME
SSLLELMSSTLKQRLTAEPVRFVYQREMPDEMVELLRSKLGLSNNDSVIAGGRYHNFKDF
IKFPNEGKRNLLNKPLPRLRHTWFDNFRNGFDAIREQDVLLYYPYHTFEHVLELLRQASF
DPSVLSIKINIYRVAKDSRIIDSMIHAAHNGKKVTVVVELQARFDEEANIHWAKRLTEAG
VHVIFSAPGLKIHAKLFVISRLEGEEIVRYAHIGTGNFNEKTARLYTDYSLLTANPKITN
EVRRVFNFIENPYRPVKFENLMVSPQNSRAMLNQLISQEIANASANKPAGIMLKINNLVD
KELVDRLYDASEAGVKIRLLIRGMCSLVPSQPGFSENIQITSIVDRFLEHDRVYVFTNDG
DEKVFLSSADWMTRNIDYRIEVAVCLLDPQLKQRVLDILELQFNDTVKARYVDKELSNSY
VLRGNKRKIRAQLAIYDYLKALEQPEPRA
NT seq
2070 nt
NT seq
+upstream
nt +downstream
nt
atgtcccaagacaggctctataccgataaagaacttagttggttatcattcaacgaacgt
gtgcttcaagaagcggcggataagagcaatccactaatagaacggatgcggttccttggt
atttactccaataatctggatgaattttacaaagtccgttttgctgatgtaaaacgacga
atattaattaatgaagaacgaggatcagccaccagcgcccgaaatgtattgaaaaaaatt
caagctaaagtggctaaaaccgatcaagaatttgatgtgctctataatgaactgttatta
gaaattgctcgcaatcaaatttttctcatcaatgaacgacaaatttcacccaatcaacaa
atctggttacgccaatattttcgtcaacatctgcggccacacattacaccaattctgatc
aatccagaaaccaacctggttgaatttctaaaagatgactacacttatctggcagttgaa
attgtccacagccagaatattcaatatgcactattagaaattccgtcagataaggtgcca
cgttttgttaacttgccgcccgaaatgccacaccgccgcaagtcaatgatcctgctagac
aatattatgcgttattgtcttgatgaaattttcaaaggctttttcgattatgattcactg
aacgcctattcaatgaaaatgacccgtgattctgaatatgatttagcaacagagatggaa
tcaagcttgctcgaactcatgtcatccacgctgaaacagcggctgacagcggaacccgta
agattcgtttatcaacgagaaatgccagatgaaatggtagaattactgcgtagcaaactt
ggcttgtcaaacaatgactcggtgattgctggcggacgctatcacaattttaaagatttc
attaaattccccaatgaggggaagagaaacctactcaataaacctttgccaagattacga
cacacttggtttgataatttccgcaatggttttgatgcgattcgtgaacaagatgtgctg
ctctattatccctatcacacctttgaacacgtattggaattattacgtcaggcatctttc
gacccgagtgtactctccatcaaaattaatatttatcgagtagcaaaagactcccgcatt
attgattccatgatccatgctgcccataacggtaaaaaagtgaccgtcgtggttgaatta
caggctcgatttgatgaagaagccaatattcattgggccaaacggctcaccgaagcgggt
gtacatgttattttctcagcaccgggactaaaaattcacgcaaaactgtttgttatttcc
cgtctggaaggtgaagaaattgttcgctatgcccatattggtaccggtaattttaatgaa
aaaaccgctcgcctctacaccgactactccttgctgaccgcaaatcccaaaattactaac
gaagtgcgccgggtattcaactttattgaaaatccctaccgcccggtcaaatttgaaaac
ctgatggtttcgccgcaaaattcccgcgcaatgctcaaccagcttatttcacaggaaatc
gccaacgccagcgcgaataagcccgcaggtattatgttaaagattaataatctggttgat
aaagagctggtggaccgcctatacgacgcttcggaagcaggggtaaaaatacgcctactg
atacgtggtatgtgttcactggtgcccagccagccaggatttagcgaaaatattcagatc
accagtatcgttgaccgtttcctcgaacatgatcgggtttacgtattcactaatgacgga
gacgaaaaagtctttctctcgtctgctgattggatgacccgtaatatcgactaccgaatt
gaagttgcggtttgcctgcttgatccacaattgaaacaacgggtactggatattctcgaa
ttacaattcaacgatacagtaaaagcccgttacgtcgataaagagctgagcaatagttat
gtgctacggggcaataagcggaaaatccgggcacaactggctatttatgactatctaaaa
gccctcgaacaacctgaaccaagagcttaa
DBGET
integrated database retrieval system
