Photorhabdus laumondii subsp. laumondii DSPV002N: A4R40_15240
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Entry
A4R40_15240 CDS
T05478
Name
(GenBank) DNA gyrase subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
plum
Photorhabdus laumondii subsp. laumondii DSPV002N
Brite
KEGG Orthology (KO) [BR:
plum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
plum03032
]
A4R40_15240
03400 DNA repair and recombination proteins [BR:
plum03400
]
A4R40_15240
Enzymes [BR:
plum01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
A4R40_15240
DNA replication proteins [BR:
plum03032
]
Prokaryotic type
DNA Topoisomerases
A4R40_15240
DNA repair and recombination proteins [BR:
plum03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
A4R40_15240
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Motif
Other DBs
NCBI-ProteinID:
AWK42751
LinkDB
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Position
complement(3552622..3555258)
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AA seq
878 aa
AA seq
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MSDIAREITPVNIEEELKSSYLDYAMSVIVGRALPDVRDGLKPVHRRVLYAMSVLGNDWN
KPYKKSARVVGDVIGKYHPHGDSAVYDTIVRMAQPFSLRYMLVDGQGNFGSVDGDSAAAM
RYTEVRMAKVAHELLADLEKETVDFVPNYDGTEQIPEVMPTKVPNLLINGSSGIAVGMAT
NIPPHNLSEVIDGCLAYIEDENISIEGLMQYIPGPDFPTAAIINGRRGIQEAYRTGRGKI
YIRARAEIEVDEKNGRETILVHEIPYQVNKARLIEKIAELVKEKRIEGVSALRDESDKDG
MRIVIEVKRDAVGEVVLNNLYSLTQLQVSFGINMVALHQGQPKLLNLKDIISAFVCHRRE
VVTRRTIFELRKARERAHILEALAVALANIDPIIELIRFASTPAEAKAALVAQPWELGSV
ATMLERAGDDAARPEWLESQYGVHEGKYYLTEQQAQAILDLRLQKLTGLEHEKLLDEYRE
LLTLIGELLFILENPERLMEVIREELLAIKAQYSDARRTEITENTADINIEDLINQEDVV
VTLSHQGYVKYQPLSDYEAQRRGGKGKSAARIKEEDFIDKLLVANTHDTILCFSSRGRLY
WMKVYQLPEASRGARGRPIVNLLPLEQNERITAILPVREYEEGLYVFMATASGTVKKTAL
QDFSRPRSAGIFAVNLNDGDELIGVDLTDGSNEVMLFSAEGKVVRFAEEAVRSMGRTATG
VRGIKLNGEDKVVSLIIPRGEGEILTVTENGYGKRTAENEYPIKSRATQGVISIKVSERN
GNVIGAIQVEPTDQIMMITDAGTLVRTRVSEVSVVGRNTQGVTLIRTAEDEKVVGLQRVA
EPEDDEDDEDGLAAEGEEVKSDSTDLPDANSSESVDPV
NT seq
2637 nt
NT seq
+upstream
nt +downstream
nt
atgagcgacattgccagagaaatcaccccggtcaatatcgaagaagagctgaaaagctcg
tatttggattatgcgatgtctgttattgttgggcgcgcactaccagatgttcgagacgga
ctaaagccggtacaccgtcgcgtgctttatgccatgagtgtactgggaaatgattggaat
aaaccctacaaaaagtctgcccgtgttgtcggggacgtcatcggtaaataccacccacat
ggggatagtgcagtctacgacacgattgttcgtatggctcagccattttccctgcgctat
atgttggttgatggtcagggtaactttgggtcagttgatggtgactcagccgccgctatg
cgttacaccgaagtgcggatggcgaaagttgcccatgagctgctagcggatctggaaaaa
gagactgtcgattttgtgccaaactatgatggtacagaacagatcccggaagtgatgcca
acgaaagtaccaaacctgctgatcaacggttcttccggtatcgcagtgggtatggcaact
aacattcctcctcataacttatccgaagttattgatggttgtctggcttatattgaagat
gaaaacatcagcattgaagggttgatgcagtatattcctggcccggatttccctactgct
gcgattattaatggtcgtcgcggtattcaggaggcttatcggactggtcgcggtaaaatt
tatatccgtgcccgtgcggaaattgaagtggatgagaagaatggtcgtgaaactatttta
gtgcacgagattccttatcaggtcaataaagcccgtctgattgaaaaaattgccgaattg
gtgaaagaaaaacgcatcgaaggggttagtgcacttcgtgacgaatctgataaagacggc
atgcggattgtgattgaagtgaaacgggatgcggtgggagaagtggttctgaataacctc
tattctttgactcaactccaggtttcttttggtatcaacatggtggccctgcatcaaggg
cagccgaagctgctgaatctgaaagatattatttcggccttcgtatgccaccgccgtgag
gtggtcacccgtcgtactatctttgaattacgtaaagcccgtgaacgagcccatattctt
gaagcattggctgtggcattggcgaatatcgatccgattatcgaacttatccgttttgca
tcgacgccagccgaggcaaaagctgcattagttgctcagccgtgggaattaggtagtgtt
gccaccatgttagaacgtgccggcgatgatgctgcccgccctgaatggctggaatcacaa
tatggcgtgcatgagggtaaatattatctgactgaacaacaggctcaggcgattctggat
ctgcgtttgcagaaactgactggtttggagcatgaaaaactgctggatgaatatcgtgaa
ttgctgacattaatcggcgaattgctgttcattttggaaaatcctgagcgcttgatggaa
gtgatccgtgaagagttgttggcaattaaggcgcaatacagcgatgcccgccgtactgaa
atcacggaaaatacggctgatatcaatattgaagatttgattaatcaggaagatgttgtt
gttacgctgtcacatcaagggtatgtcaaatatcagccgttatctgactatgaagcgcag
cgccgtggtggtaaaggtaaatccgcagcgcgtattaaagaagaagattttattgacaag
ttgttggttgccaatacccacgatacgatcctctgcttctccagccgtggccgcttgtac
tggatgaaggtttatcaattaccggaggctagccgtggtgcccgtggtcgtccgattgtt
aacctgttgccgttagagcaaaatgagcgaattacggcgattctgccggtgcgtgaatat
gaagaagggttatatgtctttatggctaccgccagtgggaccgtgaagaaaaccgcgttg
caagatttcagccgtccgcgcagtgcgggcattttcgccgttaatcttaatgatggtgat
gagctgatcggcgttgacctgactgacggtagtaacgaagttatgttgttctccgcggaa
gggaaggttgttcgttttgcagaagaagcggttcgttcaatggggcgtaccgctaccggt
gtacgtggtattaaactaaatggtgaagataaagttgtttctctgattatcccgcgtgga
gaaggagaaattctgacggtcactgaaaacggttatggcaaacgtaccgctgaaaacgaa
tatccgatcaaatctcgtgcaacgcagggggttatctcaattaaagtcagtgagcgtaat
ggtaacgtgatcggggcaattcaggttgaaccaaccgatcaaataatgatgattacggat
gctggcacattagtacgtacaagggtgtcggaagtcagcgttgttggccggaatactcaa
ggcgtaacacttattcgtaccgctgaagatgagaaagttgtcggcttacagcgggttgct
gagcccgaagatgatgaagacgatgaagatgggttggcagcagaaggggaagaggtgaaa
agtgatagcaccgatttacctgatgctaacagcagcgagtcagttgatccggtttaa
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