Photorhabdus laumondii subsp. laumondii DSPV002N: A4R40_16430
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Entry
A4R40_16430 CDS
T05478
Symbol
treR
Name
(GenBank) trehalose operon repressor
KO
K03485
LacI family transcriptional regulator, trehalose operon repressor
Organism
plum
Photorhabdus laumondii subsp. laumondii DSPV002N
Brite
KEGG Orthology (KO) [BR:
plum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
plum03000
]
A4R40_16430 (treR)
Transcription factors [BR:
plum03000
]
Prokaryotic type
Helix-turn-helix
LacI family
A4R40_16430 (treR)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
LacI
Peripla_BP_3
Peripla_BP_1
HTH_3
HTH_38
HTH_7
HTH_31
HTH_Tnp_ISL3
MarR_2
SpoIIID
HTH_IclR
HTH_AraC
HTH_23
MarR
Peripla_BP_4
TetR_N
HTH_5
HTH_Crp_2
HTH_26
HTH_28
Sigma54_DBD
HTH_24
DNA_pol_E_B
HTH_6
CENP-B_N
HTH_17
HTH_10
Sigma70_r4
TrmB
Motif
Other DBs
NCBI-ProteinID:
AWK42979
UniProt:
A0A6L9JW79
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Position
complement(3904574..3905521)
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AA seq
315 aa
AA seq
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MSNKLTIKDIARLANVSKSTVSRVLNNENSVSPQVRERVETIIQQNNFIPSKSARAMRVK
SDKIIALIVSRLGSFSENLSISAMLPLFYQHGYDPIIMESNFDPQLLQEHLRQLALRHAD
GIILFGFTGLSEESLFPWRDKMVVFAREYTGFSSVCYDDIGAVRLLMNEFYRRGHREISF
LGVDDCDTTTGFLRHQSYLACCEQQGLRPLSVQCDLSYQSGFQHINKVLREKTTALICAT
DSLALGAYKYLQQNSREDIQIGSIGNTPLLNFLYPNTVSIDLGYSEAGKYASDQLISQIN
RQYFKQKVIIPSKLA
NT seq
948 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaataaattaacaataaaagatatcgctcgcttggctaatgtcagtaaatcaacc
gtctcgcgagtattaaacaatgagaatagtgtcagcccacaagtacgtgaaagagttgaa
acgattatccaacaaaataattttattccttctaaatcagcaagagcgatgcgagtaaag
agtgacaaaatcattgctttaattgtgtcgcgtctgggatctttttcagaaaatttatcg
ataagtgccatgttacccctgttttaccagcatggttacgaccccattattatggaaagt
aattttgatccacagcttttacaggaacatctacgtcagttggcattacgtcatgcagat
ggcattattttgttcggttttactggattgtcagaagagtctctcttcccttggcgtgac
aaaatggtggtatttgctcgtgaatataccggtttttcttctgtatgttatgacgatatt
ggtgctgtccgtttattgatgaatgaattctatcggcgggggcacagagagattagtttt
cttggtgtagatgattgtgataccacgacaggttttcttcgccatcaatcctatctggct
tgttgtgaacagcaaggtttgcgcccgctttctgttcaatgtgatttaagctatcagagt
gggtttcaacatattaataaggtattgagagagaaaacgacagctttaatctgtgcaacc
gatagtttggcattaggtgcatataaatatttgcagcaaaatagtcgggaagatatacaa
ataggtagtattggtaatacacctttattgaattttttataccctaacacggtttctatt
gatttgggttatagtgaggctggtaaatatgcatctgatcaattaatttctcaaataaat
cgtcaatacttcaaacaaaaagtaatcattccgagtaagttggcttaa
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